| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3580 |
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| Symbol | |
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| ID | 6134378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 3996692 |
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| End bp | 3997903 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641643747 |
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| Product | homocitrate synthase |
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| Protein accession | YP_001770395 |
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| Protein GI | 170741740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.483441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0700115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAC CGTCCTCCGC CTCCCCTCCC CCCGCACCGT CCGGGCCGCC CTCCGCCCGG
ACCGTGTTCC TCAACGACAC CACCCTGCGC GACGGCGAGC AGGCCCCGGG CGTCGCCTTC
ACCCGCCGCG AGAAGATCGA GATCGCCGAG GCCCTCGCGG CGGCCGGGGT CCCGGAGATC
GAGGCCGGCA CGCCGGCCAT GGGCGAGGAC GAGATCGAGA CGATCCGCTC CATCGTCTCG
CTGCGGCTGC CCCTGCGGGT GATCGCGTGG TGCCGGATGC GCGAGGACGA CCTCCTCGCC
GCGGTCGCCG CGGGCGTGCC GGCGGTCAAC CACTCGATCC CGGTCTCGGA CGCCCAGCTG
CGCGGCAAGC TCGGCCGCGA CCGCGCCTTC GCCCTCGACG CGGTCGCCGC GACGGTGGCG
CGCGCGCGGC GCCTCGGCCT CGCGGTGGCG GTCGGCGCCG AGGACGCCTC GCGCGCCGAT
CCCGACTTCC TCTGCCGCGT CGCCGAAGCG GCGCGGGCGG CGGGCGCCGA GCGCCTGCGC
CTCGCCGACA CGCTCGGCGT GCTCGATCCC TTCGCCGCCG ACGCCCTGGT CCGGCGCCTC
GCCGCGGCCA CCGACCTCGC CCTCGAATTC CACGCCCACG ACTATCTCGG CCTCGCCACC
GCCAACACGC TGGCGGCGCT GCGGGCGGGG GCGCGCCACG CCAGCGTCAC CGTGACGGGG
CTCGGCGAGC GGGCCGGCAA TGCCGCCCTG GAGGAGGTGG CGGTGGCGCT GGCGCGGTTC
GGCCAGGGGC CGACCGGGAT CGACCTTCGC GCGCTGCGCC CGCTCGCCGC CGCCGTCGCG
GCGGCGGCCG AGCGTCCCCT GCCGCGCGGC AAGGCCATCG TGGGCGAGGA CATCTTCACC
CACGAATCCG GCATCCACGT CGCCGGGCTG CTGCGGGACC GGGCGACCTA CGAGGCGCTC
GATCCCGGGA TGCTCGGGCG CAGCCACCGC ATCGTGATCG GCAAGCATTC GGGGGTGGCG
GCGCTCGCCA GCGCCCTCGC GGCGCAGGGG CGCAGCCTCG ACGCGGAGGT CGCCCGCGAC
CTCCTGGAAC GGGTCCGGGC GGCGGCGGTG CGCACCAAGG CGGCGGTGCC GCCGGGCCTG
CTGCGGCGCC TCCACGACGA GTGCCTGATG AGCGCGCGGC CGCTGCCGCG CTTCGCCGCC
GCGGGGAGCT GA
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| Protein sequence | MPEPSSASPP PAPSGPPSAR TVFLNDTTLR DGEQAPGVAF TRREKIEIAE ALAAAGVPEI
EAGTPAMGED EIETIRSIVS LRLPLRVIAW CRMREDDLLA AVAAGVPAVN HSIPVSDAQL
RGKLGRDRAF ALDAVAATVA RARRLGLAVA VGAEDASRAD PDFLCRVAEA ARAAGAERLR
LADTLGVLDP FAADALVRRL AAATDLALEF HAHDYLGLAT ANTLAALRAG ARHASVTVTG
LGERAGNAAL EEVAVALARF GQGPTGIDLR ALRPLAAAVA AAAERPLPRG KAIVGEDIFT
HESGIHVAGL LRDRATYEAL DPGMLGRSHR IVIGKHSGVA ALASALAAQG RSLDAEVARD
LLERVRAAAV RTKAAVPPGL LRRLHDECLM SARPLPRFAA AGS
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