Gene M446_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3561 
Symbol 
ID6134427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3978211 
End bp3979428 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content72% 
IMG OID641643728 
Productplasmid partitioning protein RepA 
Protein accessionYP_001770376 
Protein GI170741721 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR03453] plasmid partitioning protein RepA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0949194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.167025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG CCGCCACCGC GATCCCGGCG CCGCCGCTGC CGATCTCGCC CAGCGCGATG 
ATCGGCGCGC ACGCGGCCGT GCTGCGCGCC CAGCTCCAGG CGATCTCCTC GGGCCTGTTC
CCGCCGCTCT CGGCCAAGAC GCTGCGCCGC TTCACCTCGG CCGAGGTCGC CCGCATCATC
GGCATCACGG TCTCGCGCCT GCAGCAGCTC GCCGCCGAGG GGCTCGGCCC CCAGCCCGAG
GTCTCGCCGA CCGGGCGGCG CTCCTACAGC CTCGCGGACA TTCACGGGCT TCGCGCCTAC
CTGGACGAGC AGGCCCGGGC CGGCCGGCGC TACCAGCCGC GCCGCGGCGA GGGCGACCCG
CTCCAGGTCG TCGCGGTCGC CAACTTCAAG GGCGGCTCGG GCAAGACCAC GACCTCGGCC
CACCTCGCCC AGCACCTCGT GCTCAAGGGC TACCGCGTGC TCGCCCTGGA CCTCGACCCG
CAGGCGAGCC TCTCGGCCCT GCTCGGGGTG CAGCCGGAGC TGGAGGTGGG CGAGAGCGAG
ACGCTGTTCG GCGCCATCCG GTACGATGCC GCCCGCCGCC CCCTCGAGGC GATCATCCGG
CCGACCTACT TCACCGGCCT CGACCTCGTG CCGGCCAATC TCGAACTGAT GGAGTTCGAG
CACGAGACGC CGCGCGCGCT CGGCCTGCGC CGGCCCGGCG AGCCGCTGTT CTTCGACCGG
GTCGCGCAGG CGATCGAGTC GGTGGAGGAG CGCTACGACG TCGTGGTGAT CGACTGCCCG
CCGCAGCTCG GCTACCTGAC CCTGTCGGCC CTCTGCGCCG CCTCCGCCCT GCTGATCACC
GTCCATCCGC AGATGCTCGA CGTCGCCTCG ATGAGCCAGT TCCTGGCCAT GACCGAGGAC
CTGCTCGGCG TCGTCGCGGA GCATGGCGGG CGCCTGCAAT ACGATTGGCT GCGCTACCTC
GTCACCCGCT ACGAGCAGCA GGACGCGCCG CAGACCCGGA TCGTCGGCAT GCTGCGGACG
CTCTTCGAGG ACGCGGTGCT GACCGCGCCG ATGCTCAAAT CCTCGGCCAT CTCGGATGCG
GGCCTGTCGA AGCAGACCCT GTACGAGATC GGCCGCGAGG GCGTCACCCG CTCGACCTAC
GACCGGGCGC TCGAGTCCCT GGAGGCGGTG AACGGCGAGA TCGAGGGGCT GATCCGCCGG
GCCTGGGGGC GCGCATGA
 
Protein sequence
MNQAATAIPA PPLPISPSAM IGAHAAVLRA QLQAISSGLF PPLSAKTLRR FTSAEVARII 
GITVSRLQQL AAEGLGPQPE VSPTGRRSYS LADIHGLRAY LDEQARAGRR YQPRRGEGDP
LQVVAVANFK GGSGKTTTSA HLAQHLVLKG YRVLALDLDP QASLSALLGV QPELEVGESE
TLFGAIRYDA ARRPLEAIIR PTYFTGLDLV PANLELMEFE HETPRALGLR RPGEPLFFDR
VAQAIESVEE RYDVVVIDCP PQLGYLTLSA LCAASALLIT VHPQMLDVAS MSQFLAMTED
LLGVVAEHGG RLQYDWLRYL VTRYEQQDAP QTRIVGMLRT LFEDAVLTAP MLKSSAISDA
GLSKQTLYEI GREGVTRSTY DRALESLEAV NGEIEGLIRR AWGRA