Gene M446_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3560 
Symbol 
ID6134426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3977046 
End bp3977999 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content77% 
IMG OID641643727 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001770375 
Protein GI170741720 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.178989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.149358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAC CGATCGCCTT CGTCGGCAGC CTGGACGCGC GGGAGGAGGC CGCCTTCCTG 
GCGGCGCTCC GCGCGGCCCT CCCGGAGGAG AGCCTCGTCC CGTTCCGCGC CCTCACCCCG
GCGCAGCGGG AGGCGGTCAG GGTCGCCGTG GTGGCCAATC CCGATCCCGC CGAGGTCGCG
CGCCTGCCCC GCCTCGCCTG GATCCAGAGC CTGTGGGCGG GGGTCGAGCG CCTCGTGCGC
GATCTCGGCG CGGCCGGCGT GCCGATCGTC CGGCTGGTGG ATCCGGAGCT CGCCCGCACC
ATGGCCGAGG CGGTCCTGGC CTGGACCTTC TTCCTGCAGC GCGACATGCC GGCCTACCGG
CGCCAGCAGG AGGCCGGGAT CTGGCGGCCC CTGCCCTATC GCGCCCCGGC CGAGATGACG
GTCGGCCTGC TCGGGTTCGG GCTGCTCGGC GCGGCGGCCG CGGGGCGGCT CGACGAGGCG
GGGTTCCGGG TCGCCGCCTG GAGCCGCACG CCGCGGGCGC GGCCCGGCGC GGAGGCGGGC
GCGACGCTCG CCGGGCCGGA CGGGCTGGCG CGGCTCCTCG CCGGCAGCGA CGTGGTCGTC
TGCCTGCTGC CGATGACGCC GGCGACGCGC GGCCTCCTCG GCGCGGCACA ATTCGCCGCC
ATGAAGCCGG GGGCGGCCCT GATGAATTTC GGGCGCGGCC CGATCGTCGC CACCGACGCG
CTCCTCGCCG CGCTCGAGTC CGGGCAGCTC TCCCACGCCG TCCTCGACGT GTTCGACACC
GAGCCGCTGC CCCCCGAATC CCCGCTCTGG CGGCATCCCG GGGTGACGGT CCTGCCCCAC
GTCACCGCGC CGACGAACCC CCGCAGCGCC GCCGCCATCG TGGCGGAGAA CCTGCGCGGC
TACCGGCGGA CCGGGCGCAT TCCCGCCGCC GTGGACGCGG CGCGGGGCTA CTAA
 
Protein sequence
MHEPIAFVGS LDAREEAAFL AALRAALPEE SLVPFRALTP AQREAVRVAV VANPDPAEVA 
RLPRLAWIQS LWAGVERLVR DLGAAGVPIV RLVDPELART MAEAVLAWTF FLQRDMPAYR
RQQEAGIWRP LPYRAPAEMT VGLLGFGLLG AAAAGRLDEA GFRVAAWSRT PRARPGAEAG
ATLAGPDGLA RLLAGSDVVV CLLPMTPATR GLLGAAQFAA MKPGAALMNF GRGPIVATDA
LLAALESGQL SHAVLDVFDT EPLPPESPLW RHPGVTVLPH VTAPTNPRSA AAIVAENLRG
YRRTGRIPAA VDAARGY