Gene M446_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3553 
Symbol 
ID6133960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3964158 
End bp3966101 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content76% 
IMG OID641643720 
Producthypothetical protein 
Protein accessionYP_001770368 
Protein GI170741713 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0625218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG ATCCGGTCAC CGCCCGCTGG CTGCGGCAGG CCCTGCCGGC CTTCGTCGTG 
CTCGCCGGCC TGCTCGGCGT GCTGGCGCTC GCGGTGCTGC TGGTCATGGG CCGCGAGATC
CTGGTGCCGA TCACGCTGGC AATCTTCCTG AGCTTCGTGC TGGTGCCGGC GGTGCGGGCG
CTGCGGCGCC TGCGCATCCC GCGGGTGCCC GCGGTGCTGC TCGTGGTGCT GCTCGCCTTC
GGGGCGCTCG GCACGGTCGG CAGCCTGCTC GCGGGCGAGG CGGCGCAGCT CGCCGCCGAC
CTGCCGCGCT ACTCGCTCAC GATGCGCGAC AAGATCAAGC TCCTGCAGGG CGCGACCGCG
GGCGGGGGAG GGGTCTCGCG CCTCCTCGAC ATGGTGGCGG ATCTCAGCCG CGAGCTGCAG
CCGCCGCCCG AGCCGAAGGA CCGCGCGGCG CCCGCCGCCG GCACGCCGCT CAAGGTCGAG
GTGGTGGAGG CTCGCCCGAG CGTGCTCGCG GCCCTCGGCA CCTACGCGGC CCCCGTGCTG
CACCCGCTGG CGACGACGGG CCTGATCCTG CTCTTCAGCG TCGTCATCCT CCTGCAGCGG
GAGGACCTGC GCAACCGGGC GATCCGGCTC GCGGGCTCGG GCGACCTGCG CCGCACCACG
GCGGCGATCG ACGACGCCAC CGCCCGCCTC ACCCGCTTCT TCCTGGCCCA GCTCGGCCTC
AACACCGCCT TCGGGGTGGT GATCGGCCTG GGGCTCTGGA TCATCGGCAT CCCGAGCCCG
GTGCTGTTCG GCGTCATCGC CGGCATCCTG CGCTTCGTGC CCTATATCGG CGCGGTGATC
GGCGCGCTGC TGCCGCTGGT GCTCGCGGCC GCGGTCGATC CCGGCTGGAC CATGGTCCTG
GCCACCGCCG CGCTGTTCCT CGTCGTCGAG CCGGTGGCCG GCCACGTCGT CGAGCCGCTG
CTCTACGGGC ACTCGACCGG CCTCTCGCCC GTGGCGGTGA TCCTGGCCGC GACGGTCTGG
GCCTTCCTGT GGGGACCGGT CGGCCTCGTC CTCGCCACGC CGCTCACCGT CTGCCTCGTG
GTGCTGGGCC GGCACGTCGA GCGGCTGGAA TTCCTGGAGG TGCTGCTCGG CGACGGGCCG
GCGCTGGCGC CCGAGGAGAT CTTCTACCAG CGCATGCTCG CGGGCGATCC CGGCGAGGCC
ATCGACCAGG GCGTGCAGTT CCTCAAGGCC CGCCCGCTCG TCACCTATTA CGACGAGGTG
GTGCTGGCCG CCCTGCGGAT GGCGCAGGAC GACTTCGCCC GCGGGACGGT GGCGCGCGCC
CGGCAGGACG AGGTCGGCGA GGCCTTCCGC ACCGTGGTGG AGCGCCTGGG CGCGACGCGC
CCGAGCCTGT GGCGGCGGGC GCTCGGCCGC GAGGCCGCCG CCGCCGTCGC GGCGGTCGGT
CCCGATCCCC GGGCGGCCGC GACGGTGCTC GACCGGGCGG CGCTGCCGCC GCGCTGGCGC
GGGCCCGCCC CCGTGCTCTG CGTGTCGAGC GGCGGCGCCT TCGACCTCGC CACGACCCGG
ATGCTGAGCC AGATCCTCGA CCGCCACGGC CTCCCGTCCC GGGTGACGAC GCTGCGGGAC
CTGCTGCGCG AGGGTGCCGA GGCGGTCGAC CCCCGGGCGA CCGCCCTGGT CTGCTACTCC
TACCTGGAGC CGATCAGCCT GTCGCAGATC CGCTACGTGG TGCGCCAGAC CCGCAGGACC
CTGCCGGGCG TGACCGTGCT GGTCGGCTTC TGGGGCGAGC GCGATCCCGG CACGCTGGCG
CGCCTGCGCC GGGCCACCTC GGCGGACGTG CTCGTGACCT CGCTCGGCGA CGCGCTCGGG
GCCGTCCTCG CCCGCGCCGC GCCCGCGCCG CAGCCCCAGC GGGGCGGCGC GCCGAGCCCC
GCGGCCGCGC CGGTGCGGGC GTGA
 
Protein sequence
MSEDPVTARW LRQALPAFVV LAGLLGVLAL AVLLVMGREI LVPITLAIFL SFVLVPAVRA 
LRRLRIPRVP AVLLVVLLAF GALGTVGSLL AGEAAQLAAD LPRYSLTMRD KIKLLQGATA
GGGGVSRLLD MVADLSRELQ PPPEPKDRAA PAAGTPLKVE VVEARPSVLA ALGTYAAPVL
HPLATTGLIL LFSVVILLQR EDLRNRAIRL AGSGDLRRTT AAIDDATARL TRFFLAQLGL
NTAFGVVIGL GLWIIGIPSP VLFGVIAGIL RFVPYIGAVI GALLPLVLAA AVDPGWTMVL
ATAALFLVVE PVAGHVVEPL LYGHSTGLSP VAVILAATVW AFLWGPVGLV LATPLTVCLV
VLGRHVERLE FLEVLLGDGP ALAPEEIFYQ RMLAGDPGEA IDQGVQFLKA RPLVTYYDEV
VLAALRMAQD DFARGTVARA RQDEVGEAFR TVVERLGATR PSLWRRALGR EAAAAVAAVG
PDPRAAATVL DRAALPPRWR GPAPVLCVSS GGAFDLATTR MLSQILDRHG LPSRVTTLRD
LLREGAEAVD PRATALVCYS YLEPISLSQI RYVVRQTRRT LPGVTVLVGF WGERDPGTLA
RLRRATSADV LVTSLGDALG AVLARAAPAP QPQRGGAPSP AAAPVRA