| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3545 |
|---|
| Symbol | |
|---|
| ID | 6131611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3953754 |
|---|
| End bp | 3954551 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641643714 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001770362 |
|---|
| Protein GI | 170741707 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0113148 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCT CGACGCCGTG TTCCTCTGCC GGCGCGGAGC GCGGCGCGCG CGCCGCGGAG
CGGGGCGCCG GCCGCACGCT CCTCCTCACC GGGGCGAGCC GCGGCATCGG CCACGCCACC
GTCAAGATCT TCGCCGAGGC GGGCTGGCGC GTGATCACCT GCGCGCGCCG GCCCTTCGAC
CCGAATTGCC CCTGGGAATC GGGCCGGATC GACCATGTCC CGGTCGATCT CGCCGATCCG
GCGGCCACCG GCCGCGCGGT CGCGCGCGTG AAGGAGCTGA TTGGCGACGG GCCCCTCCAC
GCGCTCGTGA ACAATGCCGG CATCTCGCCC AAGACCCCGG CCGGCGGGCG GCTGTCCTCG
GTCGACACGC CGCTGCAGAC CTGGATGGAC GTCTTCCACG TCAACTTCCT GGCGCCGGTG
ATCCTGGCGC GCGGGCTGCT CGACAACCTG GTGGCGGCGG GCGGCTCGAT CGTGAACCTG
ACCTCGATCG CGGGGACGCG GGTGCATCCC TTCGCGGGCG CGGCCTACGC GACCTCGAAG
GCCGCCCTGT CCTGCCTGAC CCGCGAGATG GCCTTCGACT TCGCGCCCTA CGGCGTGCGG
GTGAACGCCA TCGCGCCCGG GGAGATCCGC ACCGAGATCC TCTCGGCCGA GACCGAGGCG
CATCTCGCGC CGACCATCCC GATGCGCCGC ATCGGCACGC CCGCCGAGGT GGCCTCGGTG
ATCTACTTCC TGTGCTCGCA GCACGCGAGC TACGTCACCG GCGAGGAGGT GCAGATCAAC
GGCGGCCAGC ACGTGTAG
|
|---|
| Protein sequence | MSTSTPCSSA GAERGARAAE RGAGRTLLLT GASRGIGHAT VKIFAEAGWR VITCARRPFD
PNCPWESGRI DHVPVDLADP AATGRAVARV KELIGDGPLH ALVNNAGISP KTPAGGRLSS
VDTPLQTWMD VFHVNFLAPV ILARGLLDNL VAAGGSIVNL TSIAGTRVHP FAGAAYATSK
AALSCLTREM AFDFAPYGVR VNAIAPGEIR TEILSAETEA HLAPTIPMRR IGTPAEVASV
IYFLCSQHAS YVTGEEVQIN GGQHV
|
|---|
| |