| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3524 |
|---|
| Symbol | |
|---|
| ID | 6131771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3929407 |
|---|
| End bp | 3931257 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641643693 |
|---|
| Product | phosphogluconate dehydratase |
|---|
| Protein accession | YP_001770341 |
|---|
| Protein GI | 170741686 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0350614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.499823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAT CTGAGCCAAC GTCCCCCCTC CACGCGCGCC TCGGCGAGGT GACGGAGCGG
ATCGCGCGGC GCAGCCGCGA CCGGCGCGCG CGCTACCTGG AGCGCATCGC CGGGGAGGCG
GCCCGCGCGC CCCGGCGCCG CGCCCTCGGC TGCGCCAACC AGGCCCACGG CTTCGCCGCC
TGCGGCCCGG GCGACAAGGC GATGCTGCGC GACGGCCAGG GCGCCAGCCT CGGCATCGTC
ACCGCCTACA ACGACATGCT CTCGGCCCAC CGCCCCTACG AGCGCTACCC GGACCTGCTG
CGCGAGGCGG CCCGCGAGGC CGGCGGCGTC GCCCTGGTGG CGGGCGGCGT GCCGGCCATG
TGCGACGGCA TCACCCAGGG GGAGGCCGGC ATGGAACTCT CCCTGTTCTC GCGCGACGTC
ATCGCCCTCT CGACCGCCGT CGCCCTCTCG CACCAGACCT TCGACGCCGC CGTGTTCCTC
GGCATCTGCG ACAAGATCGT GCCGGGCCTC GTCATCGGCG CCCTCGCCTT CGGGCACCTG
CCGGCGGTGT TCATCCCCTC CGGCCCGATG ACGAGCGGCC TGCCCAACCC CGAGAAGGCG
AAGATCCGCC AGCTCTACGC CGAGGGGAAG GTGGGGCGCG ACGCCCTGCT CGCCGCCGAA
TCCGACTCCT ATCACGGGCC GGGCACCTGC ACCTTCTACG GGACGGCCAA CACCAACCAG
ATGCTGATGG AGATGATGGG CCTGCACCTG CCCGGGGCCT CCTTCGTCAC GCCGGACACG
CCCTTGCGCG ACGCGCTGAC CCGGGCCGCC GCGCAGCGCG CCCTCGCCAT CACGGCGCTC
GGCAACGAGT ACCTGCCGGT CGGGCAGCTC CTGGACGAGC GGGCCTTCGC GAACGGGATC
GTGGGGCTGC ACGCGACCGG CGGCTCGACC AACCACACGC TCCACCTGCT GCCGATGGCG
GCGGCGGCCG GCATCACCCT GACCTGGGAG GACCTCTCCG ACCTCGCCGA GGTGACGCCG
CTCCTCGCCC GCGTCTACCC GAACGGCACG GCGGACGTGA ACCACTTCCA CGCGGCGGGC
GGCATGCCCT TCGTGATCCG CGAACTCCTC GGCGAAGGGC TGCTGCACGC GGACGCGCAG
ACCGTGCTCG GGGCGGGGCT GCACGCCTAC ACGCGCGAGC CGGTGCTGAC CGAGGCGGGC
GGCCTCGCCT GGCGGGAGGG CCCGGCGGAG AGCGGCGAGA CCGGCGTGCT GCGGGGCGCG
GCGGCGCCGT TCCAGCCGAC CGGCGGCCTC GCCGTGCTGG CGGGCAATCT CGGCCGCGCG
GTGATCAAGA CCTCGGCGGT GGCGCCCGAG CGGCAGGTGA TCGAGGCGCC CGCGCGGGTG
TTCCACTCGC AGGAGGCGCT GCAGGCGGCC TTCCGGGCGG GCGAGCTTCG GGGCGACGTG
GTGGCGGTGG TGCGCTTCCA GGGCCCGAAG GCGAACGGCA TGCCGGAACT GCACAAGCTG
ATGCCGCCGC TCGGCGTGCT GCAGGACCGC GGCCACCGGG TCGCGCTGGT CACGGACGGC
CGCCTCTCGG GCGCCTCCGG CAAGGTGCCC TCGGCCATCC ACGTCACCCC CGAGGCGGCG
GAGGGCGGGC CGATCGCCCG GATCCGCGAC GGGGACGTGG TGCGCGTCGA CGCCCCGGCC
GGGCGGCTGG AGGTGCTGGT GCCGCCGGCC GAGTGGGCGG CGCGCGCGCC CGCGACCGCG
GACCTCGCCG CCTCCCATGT CGGGATCGGC CGCGAGCTGT TCGGGGCCTT CCGGGCGGCG
GTCGGCGCGG CGGATGCGGG CGCCTCCATC TTCGGCGAGG CGCTCGGCTG A
|
|---|
| Protein sequence | MTTSEPTSPL HARLGEVTER IARRSRDRRA RYLERIAGEA ARAPRRRALG CANQAHGFAA
CGPGDKAMLR DGQGASLGIV TAYNDMLSAH RPYERYPDLL REAAREAGGV ALVAGGVPAM
CDGITQGEAG MELSLFSRDV IALSTAVALS HQTFDAAVFL GICDKIVPGL VIGALAFGHL
PAVFIPSGPM TSGLPNPEKA KIRQLYAEGK VGRDALLAAE SDSYHGPGTC TFYGTANTNQ
MLMEMMGLHL PGASFVTPDT PLRDALTRAA AQRALAITAL GNEYLPVGQL LDERAFANGI
VGLHATGGST NHTLHLLPMA AAAGITLTWE DLSDLAEVTP LLARVYPNGT ADVNHFHAAG
GMPFVIRELL GEGLLHADAQ TVLGAGLHAY TREPVLTEAG GLAWREGPAE SGETGVLRGA
AAPFQPTGGL AVLAGNLGRA VIKTSAVAPE RQVIEAPARV FHSQEALQAA FRAGELRGDV
VAVVRFQGPK ANGMPELHKL MPPLGVLQDR GHRVALVTDG RLSGASGKVP SAIHVTPEAA
EGGPIARIRD GDVVRVDAPA GRLEVLVPPA EWAARAPATA DLAASHVGIG RELFGAFRAA
VGAADAGASI FGEALG
|
|---|
| |