Gene M446_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3520 
Symbol 
ID6130271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3925664 
End bp3926887 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID641643689 
Productextracellular ligand-binding receptor 
Protein accessionYP_001770337 
Protein GI170741682 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.363976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.545433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTCGC GGTTCATCGG ATACGCGCTG GGGCTCTCGC TCGCGGCCTT CGCGGCCGCG 
GGCGGGCGGG CCGCCGAGGC GGTCAGCGAC GGCGTCGTGA AGGTCGGCAT CCTCACCGAC
ATGTCGGGGA TCTACGCGGA CTTCACCGGC CGCGGCTCCG CGGTGGCGGC CCAGATCGCC
ATCGACGAGG TCGGCGGCAA GGTGCTCGGC GCCCCGGTCG AACTGGTCGC GGCCGACCAC
CAGAACAAGC CCGACATCGC CGCGAACCTC GCCCGCGAGT GGTTCGACCA GGGCAAGGTC
GACATGATCG CCGATTTCCC GACCTCCTCC ACGGCGCTCG CCGTGATGGA GATCGCCCGC
CAGAAGAACC GGGTGACGAT GCTCTCGGCG GGCGTCGCCA TGGCGGCGAT CACCGACAAG
TGCTCGCCGC TCAGCGCGCA GTGGATGGTC AACACCGCCG CGCTCGCCGC CGGCACCGCC
AAGGCGCTGC TCCGGGCCGG CCGCACATCC TGGTACTTCG TGACGGCGGA CTACACGTTC
GGCCACTCGC TGGAGCGCGA CGCCGCCGCG GTGGTGGAGG CCGGGGGCGG CAAGGTGCTG
GGCACCTCGC GCCATCCCTT CCCGGGAGGC GACTTCTCCT CCTACATGCT GAAGGCCCAG
GCCACCGGCG CCCAGGTGAT CGCCCTCGCC AATGCCGGGG CCGACACCAT CAACGCCATC
AAGCAGGCCG CCGAGTACGG CATCGGCCGC GGCGACAAGC AGGTCATCGC GCCGCTCCTC
ACCTACATCA CGGACGTGAG GAGCCTCGGC CTCGCCAAGG CCGAGGGCAT GTACCTCACC
GAGGCCTTCT ACTGGGACTT CGACGCGCGC TCGCGCGCCT TCGCGGAGAC CTACTTCGCA
CGCACGAAGC GGATGCCGAG CGCCTCGCAG GCGGCGGTCT ACTCGGCGGT GCTGAGCTAC
CTGCGGGCGA TCGAGGCCGC CGGCACCGAC GAGGCCGGCG CCGTGATGGC GAAGCTGCGG
ACCATGACGA TCGACGACGC GGTGATCCGC AACGGCCGCC TGCGCGCGGA CGGCGCCCTG
GTGCACGACC TGCTGCTGCT CCAGGTCAAG AAGCCCTCCG AGTCGAAGCG CGACTGGGAC
TTCTACACCG TCAAGGCGGT GCTCAAGGGC GAGGACGTCT ATCCGAAGCC GAGCGACGCC
TGCCCCCTCA ACGCCCGGGG CTGA
 
Protein sequence
MRSRFIGYAL GLSLAAFAAA GGRAAEAVSD GVVKVGILTD MSGIYADFTG RGSAVAAQIA 
IDEVGGKVLG APVELVAADH QNKPDIAANL AREWFDQGKV DMIADFPTSS TALAVMEIAR
QKNRVTMLSA GVAMAAITDK CSPLSAQWMV NTAALAAGTA KALLRAGRTS WYFVTADYTF
GHSLERDAAA VVEAGGGKVL GTSRHPFPGG DFSSYMLKAQ ATGAQVIALA NAGADTINAI
KQAAEYGIGR GDKQVIAPLL TYITDVRSLG LAKAEGMYLT EAFYWDFDAR SRAFAETYFA
RTKRMPSASQ AAVYSAVLSY LRAIEAAGTD EAGAVMAKLR TMTIDDAVIR NGRLRADGAL
VHDLLLLQVK KPSESKRDWD FYTVKAVLKG EDVYPKPSDA CPLNARG