Gene M446_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3506 
Symbol 
ID6131166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3911010 
End bp3912128 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content75% 
IMG OID641643675 
Producthigh-affinity nickel-transporter 
Protein accessionYP_001770323 
Protein GI170741668 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.739045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC TGCCCGACCT GCTGCAGCAG GGGACCGCGC ATGCGTGGCT GTTCGTGCCG 
AGCGCGATCC TGCTCGGGGC CCTGCACGGG CTCGAACCCG GCCACTCCAA GACGATGATG
GCCGCCTTCA TCATCGCCGT GCGCGGGACG GTCGCGCAGG CGGTGCTGCT GGGGCTGGCG
GCGACGCTCT CGCACACGGC GCTGGTGTGG GTGATCGCGC TGGCCGGGCA ATCCTTCGGG
CAGCAATGGG GGGAGACCTC CGAGCCCTAC TTCCAGCTCG TCTCGGCGCT CCTGATCGTC
GCCCTGGCCC TCTGGATGGC GTGGCGCACC TGGCGCGAGC AGCACCACGA CCACCCTCAC
CACCACGGCG AGGCGCGGGC CGTCGCGACC CGCGACGGGC TCCTCGCGCT GGAGGTATTC
GAGGACGGCG TGCCGCCGCG CTGGCGCCTG CGCGCCGAGC GCGGCCCGCT GCCGGATCCC
GGGCGGGTCC GCCTGGAGAT CCTGCGCCCG GACGGCACCC GGCAGGCCTT CGCGTTCGTG
CGCGCGGGCG CCGTCCTGGA GAGCCGGGAG GAGATCCCGG AGCCGCACGC CTTCACGGCG
CGGCTGCACC TCGACGGCCC GGCCGGGGCG GAGACCCACG AGGCCGCCTT CGAGGAGCCC
GCCCATCCCC ACGCCCACAT GAACCTCGGC GAGGAGGACG ACGCCCATGC CCGCGCCCAT
GCGCAGGACA TCCGGCGGCG CTTCGCGGGC CGCCGCGTCA CCACGGGGCA GATCGTCCTG
TTCGGCCTGA CCGGCGGCCT GATCCCGTGT CCGGCCGCGA TCACCGTGCT GCTGCTGTGC
ATCCAGCTCA AGCAGTTCAG CCTCGGCTTC GCGCTGGTCG TGTGCTTCAG CCTCGGGCTC
GCTGCGACGA TGGTGTCGGC GGGCGTGCTG GCCGCGCTGA GCGTCACGCA CGTCGCCTCG
CGCTGGTCCG GGTTCGGCCG CCTCGCCCGG CGGGCGCCCT ACGCCTCGGC GGCGCTGATC
GTGCTGGTCG GCCTCTATAC CGGCTGGCTC GGCTGGCAGG GTATCCGGCA CGGCCCGGCC
GCGCACGCGG CCCAGGCGGT CGCCGCGCGG CGCGCGTGA
 
Protein sequence
MTSLPDLLQQ GTAHAWLFVP SAILLGALHG LEPGHSKTMM AAFIIAVRGT VAQAVLLGLA 
ATLSHTALVW VIALAGQSFG QQWGETSEPY FQLVSALLIV ALALWMAWRT WREQHHDHPH
HHGEARAVAT RDGLLALEVF EDGVPPRWRL RAERGPLPDP GRVRLEILRP DGTRQAFAFV
RAGAVLESRE EIPEPHAFTA RLHLDGPAGA ETHEAAFEEP AHPHAHMNLG EEDDAHARAH
AQDIRRRFAG RRVTTGQIVL FGLTGGLIPC PAAITVLLLC IQLKQFSLGF ALVVCFSLGL
AATMVSAGVL AALSVTHVAS RWSGFGRLAR RAPYASAALI VLVGLYTGWL GWQGIRHGPA
AHAAQAVAAR RA