| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3458 |
|---|
| Symbol | |
|---|
| ID | 6133104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3842659 |
|---|
| End bp | 3843696 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641643625 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
|---|
| Protein accession | YP_001770277 |
|---|
| Protein GI | 170741622 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.304874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.001883 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCA CCCGACGCAC CTTCCTCGGC GCCGCCCCGC TCGTCGGCGG CGCGGCGCTC
GCCGCGGCGG GGCGCGCGCG GGCGCAGGGC CGGGCGGCGC CCCTGCGGGT CGGCATCATC
CCGATCCTCG CCGCCGCGCC GATCTTCGTC GCCGAGAAGG AGGGCTGGCT CAAGGAGGCC
GGTCTCACGC TCGCGATCAC CACCTTCGAA TCCGGGCCGA ACATGATCCA GGCCCTGGCC
TCGGGCACGC TCGACGTCTA CGTGGCCGGC GTGGCGCCCC TCGGGGTGGC CCGCGCGCGC
GGCATCGACG TCAAGGTCGT GACCGCGACC GCGGTCGAGG AGAACGTCTT CGTCGCGGGA
TCGCGGCTCG CCCGCCACTT CGAGCCCGGC CTCGCGCCCG CGGAGGCGTT CCGGCGCTAC
CGCGCCGCCG CCGGCGCGCC GGCCCGGCTC GCCACCCAGC CGCTCGGCTC GGTGCCCAAC
ACCACCCTGC AGCACTGGCT GTGGGAGGTG GCCAAGGCCG ATCCCAAGGA CGTCACCCTC
GTGTCGATGG GCATCGACGC CACCCAGCAG GCCATCCTGG TCGGCGCCGT CGAGGGCGGG
ACCCTGCGCG AGCCGGCCGT GTCGATCGTC ACCGGCCGCG ATTCGGGCAT CCGCCTCGTC
GCCCTGGGCG GCGCGATGTT CCCCGGCCAG CCCGGCACCG TGGTGGCCCT GACCCGGGCG
CTCCTCGACC GGGAGCCCGA GGCCGCGCAG GCGGTGGTGA CCGGGATCGT CCGCGCCGTC
GACCTGATCG GCCGCGAGCC CGGCCGCGTC GCGCCGGTGG TCGAGGCCGC CCTCGGCAAG
GGACTCGTCG ACCTCGCCAC GATCCGCCGG GCCCTCGCCT CGCCGGCGAC GCGCTTCACC
GCCGATCCGG GCGCGATCGT GGAGGCCACC GCCGCCATGC AGCGCTACCA GGTCAAGCTC
GGCGCCCTCG ACCGCGAGGT CCCCCTCAAC GGCCTGTTCG AGCCGCGCCT CTACGCGCGC
GCCGCGGCCT CCCGGTGA
|
|---|
| Protein sequence | MTFTRRTFLG AAPLVGGAAL AAAGRARAQG RAAPLRVGII PILAAAPIFV AEKEGWLKEA
GLTLAITTFE SGPNMIQALA SGTLDVYVAG VAPLGVARAR GIDVKVVTAT AVEENVFVAG
SRLARHFEPG LAPAEAFRRY RAAAGAPARL ATQPLGSVPN TTLQHWLWEV AKADPKDVTL
VSMGIDATQQ AILVGAVEGG TLREPAVSIV TGRDSGIRLV ALGGAMFPGQ PGTVVALTRA
LLDREPEAAQ AVVTGIVRAV DLIGREPGRV APVVEAALGK GLVDLATIRR ALASPATRFT
ADPGAIVEAT AAMQRYQVKL GALDREVPLN GLFEPRLYAR AAASR
|
|---|
| |