Gene M446_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3439 
Symbol 
ID6131874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3818478 
End bp3820244 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content72% 
IMG OID641643608 
ProductABC transporter related 
Protein accessionYP_001770260 
Protein GI170741605 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00571731 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCCCA GCCACCACGG GGCTCGCGCC CCCGCGCCGG CACGCGACGA CGCGGACGGG 
AGCGCGGCGC CGACCGACGC GAAGCTGAGG CACTTCATCC GGCTGGCCGG CGGGTTCTGG
ATCACGCGGA GTGCCGGCCG CGCCTGGGCG CTGGTGGCCC TCAACCTCGC CTCCCTGAGC
GCGGCCGTCC ACACGAGCGT CCTGAGCACC CGCTACACCA AGGCGCTCTA CGACATGCTG
GCCGAGCGGG CGCTCGACCG GCTGCCCGCG GTCATGGCCC TGCTCGCCGT CGTGCTGGGC
GCCAGCATCG TGCAGGCGGC GGTCGCGTTC TCGGTGCCCA CCGCTATCGC GTTGGAGTGG
CGCCAGTGGC TCACCGGCCG ATACGTCGCG CGCTGGCTGC ACGGCCGCGC CTATTACGAG
GGCCAGCGCC GCGATCTCCT CGACAATCCC GACCAGCGCA TCGCCGAGGA TGTCGATGCG
TTCACCCACG CCGCCGTGAC CAATGCCTTC GCGATGTTCC AGGTTGCGTC GATGGGCATC
ACCTTCGGGA TCATCCTGTG GGACGCTTCC GGCGACGGCA GGGTCACGAT CGGCCCGGCG
ACGTTCCAGG TTCCCGGCCT GCTGCTCTGG GTCACCACGA TCTGGGCGGT CCTCCACACC
GCCCTGGTGA TCTGGGTCGG GCGCAAGCTG CCGCGCCTCG TCGCGGCGGG GCAGCGGGTC
GGGGCGGATT TCCGCTTCAA GCTGATCCAG GTCCGGCGCG CCGCCGAGCA GGTCGCGCTC
CTGCGCGGCG AGGCGGCCGA GGCTGCCGCC CTGACCGATC GCTTCTCGGC CATCCGCACC
AACGTCTACG CCCAGATCGT CCAGGCGGTG AGGATCGCCG TCACCAATGC CACGGTCGGG
ACGGTCGAGG AGCTCTTCCT GCTGCTGCTC GTGATGCCGC GCTACCTCGC GGGTGGGTCG
TCGCTCGGCG AGATGTTTCA GGCGCAGCGA TCGATGGGCC AGTACAACGG CACGATCGCG
TATTTTGCCC AATCCGCCAC CGCGCTCCAG ACCCTGCGCG GCACGATCCG CCGCCTGCGC
GCCTTCGACG CGATGATCGA CGCCGTCCCG GTCCCGCCCG CTTCCGAGCA GCCCGGCGAC
GCGGCGACGA TGGTCGCGGT CGAGACCCTG TCCGTGGCCC GTCCCGGCGG CGCGACTCTC
CTGACCCTGC CGGCCTGGCG GGTGGAGCGA GGGCAGCGCT GGCTCATCCG AGGCCCCTCG
GGCATCGGCA AGAGCACGCT GCTGCGCGCG CTGGCCGGGA TCTGGCCGGA AGTCGCTGGC
CGGCTGACGA TGCCGGCCCG CGAGACGACC TTGTTCATGC CGCAGACGCC CTACCTGCCG
GTCGGCCCGC TGCGGGACGC CATCACCTAC CCGTCGCGGG AATCGGTGCC GGACGCGGTG
CTGCGCGACC TTCTCGGGCG CGTCGGCCTC GCGGAGCGGG CAGCGGATCT CGACCGGGCC
GCCGAGTGGG ACCAGCACCT CTCGCCCGGG GAGCAGCAGC GCCTCGCCTT TCTGCGTCCC
CTGCTGCTGC GCCCGGCGCT GATCCTGCTC GACGAGGCGA CGAGCGCGCT CGATCCGCCG
AACGCGCGTG CCATGTACGC GCTGCTCCTC GAATCCCTGC CGGACCTCAC CCTGATCAGC
ATCGCGCATT CCGACGTGCT CGACGCATTC CACACCCACC GGCTCGTCCT CGGCGGGCCG
AACGACGCGC GGGAGCAGGC CCCGTGA
 
Protein sequence
MAPSHHGARA PAPARDDADG SAAPTDAKLR HFIRLAGGFW ITRSAGRAWA LVALNLASLS 
AAVHTSVLST RYTKALYDML AERALDRLPA VMALLAVVLG ASIVQAAVAF SVPTAIALEW
RQWLTGRYVA RWLHGRAYYE GQRRDLLDNP DQRIAEDVDA FTHAAVTNAF AMFQVASMGI
TFGIILWDAS GDGRVTIGPA TFQVPGLLLW VTTIWAVLHT ALVIWVGRKL PRLVAAGQRV
GADFRFKLIQ VRRAAEQVAL LRGEAAEAAA LTDRFSAIRT NVYAQIVQAV RIAVTNATVG
TVEELFLLLL VMPRYLAGGS SLGEMFQAQR SMGQYNGTIA YFAQSATALQ TLRGTIRRLR
AFDAMIDAVP VPPASEQPGD AATMVAVETL SVARPGGATL LTLPAWRVER GQRWLIRGPS
GIGKSTLLRA LAGIWPEVAG RLTMPARETT LFMPQTPYLP VGPLRDAITY PSRESVPDAV
LRDLLGRVGL AERAADLDRA AEWDQHLSPG EQQRLAFLRP LLLRPALILL DEATSALDPP
NARAMYALLL ESLPDLTLIS IAHSDVLDAF HTHRLVLGGP NDAREQAP