Gene M446_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3426 
Symbol 
ID6132053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3801109 
End bp3802320 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content74% 
IMG OID641643596 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001770248 
Protein GI170741593 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0253848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC AGGGCCCGCT CACGGGCGTG AAGGTGGTCG AGCTCGCCCA CATCATGGCG 
GGCCCGGTCT GCGGCCTGAT GCTCGCCGAC ATGGGGGCGG AGGTCATCAA GGTCGAGAAG
AGCGAGGGCG GGGACGACAC GCGGCGCATG GTGCCCCCGA CCGTGGCGGG CGAGAGCGCC
GCCTACATGA TGATGAACCG CGGCAAGCGC GGCCTCGCCC TCGACCTGAA GCACCCGGAC
GGGAAGGCGG TGCTGCGCCG CCTGCTGCGG GACGCCGACG TGCTGATCGA GAACTACCGG
GCAGGGACGA TGGAGCGGCT CGGCTTCGGC TACGCCGCCC TGCGCCGGGA CAATCCGGGG
CTGATCTACT GCTCGCTCTC CGGCTTCGGC CGCACCGGGC CCTACGCGGA CCGGGCGGGG
TTCGACCTCG TGGCCCAGGG CATGAGCGGC CTGATGAGCA TCACCGGCGA GGGGCCGGGC
CGGCCGCCGG TGAAGAGCGG GGCGCCGGTC ACCGACATCA CGGCGGGGAT CGTGGCGGCG
ATGGGCGTGC TCGCGGCCTA CGTGCACCGG CTGAAGACCG GCGAGGGTCA GGAGGTCGAC
ACCTCCCTGT TCGAGGCGGG CATCGTCCAG ACCTACTGGC AATCGGCGAT CGCGCTCGCG
ACCGGGATCG CGCCGGGCCC AATGGGCTCG GCCCACCCGC TCAACGCGCC CTACGAGGCC
TTCCCGACCG CCGACGGCTG GATCACCGTC GGGGCCGCCA ACCAGACGAA CTGGCTGCGG
CTCCTCGCGG TGCTGGGGGC CGAAGCCCTG GCGGAGGATC CGCGCTTCCG CGAGAATCGC
GGCCGGATGG AGCACCGCGC CGCCCTCGCG GCCGCGCTCT CGGCCTATTT CCGCGAGGCG
AGTTCCGCCG AGTGGCTGGA TCGGCTGGAA GCCGGGGGCG TGCCGGCGGG CCCGGTCCTC
GACGTAGCGG CGATGCACCG CGACCCGCAG ACGCTGGCGC GCGAGATGGT CGTGGAGGTG
GCGCATCCCC GCGCCGGGCC GATGCGCACG CTCGGCCTGC CGGTGAAGTT CTCGGCGACG
CCCGGACGCG TGCACGGCCC GGCCCCGCTG CTGGGCGAGC ACAGCCGCGC GATCCTGGCG
GCCCACGGCT ACGATGCGGC GGCGATCGAC GACCTGATCC GGCGCGGCGT GGTGCGCGAG
AGCGCGGCCT GA
 
Protein sequence
MTRQGPLTGV KVVELAHIMA GPVCGLMLAD MGAEVIKVEK SEGGDDTRRM VPPTVAGESA 
AYMMMNRGKR GLALDLKHPD GKAVLRRLLR DADVLIENYR AGTMERLGFG YAALRRDNPG
LIYCSLSGFG RTGPYADRAG FDLVAQGMSG LMSITGEGPG RPPVKSGAPV TDITAGIVAA
MGVLAAYVHR LKTGEGQEVD TSLFEAGIVQ TYWQSAIALA TGIAPGPMGS AHPLNAPYEA
FPTADGWITV GAANQTNWLR LLAVLGAEAL AEDPRFRENR GRMEHRAALA AALSAYFREA
SSAEWLDRLE AGGVPAGPVL DVAAMHRDPQ TLAREMVVEV AHPRAGPMRT LGLPVKFSAT
PGRVHGPAPL LGEHSRAILA AHGYDAAAID DLIRRGVVRE SAA