Gene M446_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3390 
Symbol 
ID6135312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3763987 
End bp3764703 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID641643562 
Productprotein TolQ 
Protein accessionYP_001770214 
Protein GI170741559 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.431246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.281119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG CCGATGCCGT CCAGGCCCTT CCGGTCCACG AGATCACCCT GTTCGGCCTG 
TTCTGGCAGG CGCACGTCGT GGTCAAGGTG GTGATGCTCG GGCTGCTCGG CGCCTCCGTC
TGGTGCTGGG CCATCATCGT CGACAAGACG CTGCTGTTCC GCCGTGCCAA GGCCGAGATG
GACGCCTTCG AGGAATCCTT CTGGTCGGGC CGCTCGCTGG AGGAGCTCTA CCGCTCCTTC
CACGACAAGG CGCCGACCGG GCTCGCGGCG GTCTTCGTCG CGGCGATGCG CGAGTGGAAG
CGCTCCTTCG AGGGCTCGGG CCGCTCGATC CAGAGCCTGA GCCAGCGCAT CGACAAGGTG
CTCGACGTGA CCATCCAGCG GGAGGTCGAG CGCTTCGAAT CGCGCCTGCT CTTCCTGGCC
TCGATCGGCT CGGCCGGCCC CTATATCGGC CTGTTCGGCA CCGTCTGGGG CATCATGACC
GCCTTCACGT CGATCGCCGC CTCCAAGAAC ACCAGCCTGG CGGTGGTGGC GCCTGGCATC
GCGGAGGCGC TCTTCGCCAC CGCGATCGGC CTCTTCGCGG CGATCCCGGC CGTGCTCGCC
TACAACAAGC TCCAGGCCTC GGTGGGCAAG CTGCAGGGAC GCCTCGAAGG CTTCGCCGAC
GAATTCTCCG CCATCCTGTC GCGCCAGATC GACGAGCGCC TCGCGCTCGT CGCCTGA
 
Protein sequence
MNPADAVQAL PVHEITLFGL FWQAHVVVKV VMLGLLGASV WCWAIIVDKT LLFRRAKAEM 
DAFEESFWSG RSLEELYRSF HDKAPTGLAA VFVAAMREWK RSFEGSGRSI QSLSQRIDKV
LDVTIQREVE RFESRLLFLA SIGSAGPYIG LFGTVWGIMT AFTSIAASKN TSLAVVAPGI
AEALFATAIG LFAAIPAVLA YNKLQASVGK LQGRLEGFAD EFSAILSRQI DERLALVA