| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3225 |
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| Symbol | fliF |
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| ID | 6132683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 3568836 |
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| End bp | 3570554 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641643413 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001770065 |
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| Protein GI | 170741410 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0389507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.995627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGTC GCGAACAGGC CGAGAGGCTC TGGAACAACA TCATCGAGCT CGGCGCCCGG
CGCCTCGCGG CGCTCGGCAT CATCGGGCTG ACGGTGTTCC TCGCGGTCGG GCTCGGCGCC
TATTACCTCA GCCGCCCCGC CCAGGAGACC CTCTACGGGG GATTGAGCCG CGACGATGTC
GGCCGCATCG GCTCGGTGCT GAAGGACGCC AACATCCCCT TCGACGTCAG CACCGACGGC
ACCGCCGTGC TGGTCCCCTA CGGGCACACC GCCCAGGCGC GCATGCTGCT CGCCGAGAAG
GGCCTGCCGC AGAGCTCGAA ATCCGGCTAC GAGCTGTTCA ACGACCTCGG CTCCCTCGGC
CTCACCTCCT TCATGCAGGA GGTGACGCGG GTGCGCGCCC TGGAGGGCGA GATCGCCCGC
ACCATCCAGA CCATGAAGGG CGTGAAGGCG GCGCGGGTCC ACATCGTGCT GCCGGATCGC
GGCTCGTTCC GGCGCGAGCA GCAGCCGCCC TCCGCCTCGG TGGTGGTGCG CACCGAGCCG
GCCGACGACG GCAGCGGCGC CCAGGCGATC CGCCACCTCG TCGCCTCGGC GATCCCGGGC
ATGAAGCCCG AGCGCGTCAC CGTGATCGGC ACCGACGGGA CGCTGCTCCT CTCCGGCGAC
GACGTCGGCA ACGCCCCGAC CGGCAAGATG GCGAACCTGG AGAAGCTCGT GAACCGCGAG
ATCCAGGACA ACATCCGCCG CACCCTGACG CCCTATCTGG GCGTCGGCAA TTTCGAGGTC
AGCGTCGCGG CCCGGCTCAA CACCGACAAG ACGAGCACCA ACGAGACGAT CTTCAACCCC
GACCAGCGGG TCGAGCGCTC CGTCAAGGCG ACGCGGGAGA CCGAGAACTC GCAGAACCGC
TCCTCGCAGC GGCCGACCAC GGCCCAGCAG AACCTGCCCG ACCAGCGCAC GCGCTCGGAC
GGGAACGACA CGTCGAGCAC CGAGACCCAG AAGCGCGAGG ACCTCACCAA TTACGAGATC
TCCTCGAAGA CCATCCAGAC GGTGAGCGAC GGCTACGGGA TCAAGCAGAT CTCGGTGGCG
GTGCTGGTGA ACAAGTCTCG CCTGTCCTCG CTCGCCGGCC CCAACGCGCC GCCCGCCGCG
ATCGACCAGC AGATCGGCGA GATCGAGCAG CTCGTCGCCT CGGCGGCCGG CTTCAGCAAG
GAGCGCGGCG ACCACGTCAA GGTCGCGGCG GTGGGCTTCG TCAACGACGG GGCGCCCCTC
GAGCCGGTGC CGCCGCTCAG CCTGACCGAG GTGCTGATGC GCCAGTCGGC GACGCTGATC
AACGCCGCCA CCATCCTGGT CGTCGCCTCC CTGCTGATCT GGTTCGGCCT GCGCCCGGCC
CTCCGGGCCA TCCTGGAAGT CCCGGCGGCC GAGCAGGAGA TCGCGGCCCT CGCGGCCGAG
GGCGCGGCAG GCGCGGTGCC GGCGCTGCCG GGCGCCGAGG CCGGGAGTGC CGCCGCGGGC
CTGCTCGAAG GCTCGCCGGA GGCGGCGGCC CTCGCGGCCG CGGGCGGCAC GCCGGGGCCC
GCGCAGCTCG GCCCGCCCGT CATGGCGAGC CTGATCGACG ATCTCACCAA CCGCATGAAC
TCCTCGCCGC AGAAGAAGCT GGAGCAGATG ATCGAGTTCG ACGAGGAGCA GGCCGCCAAC
ATCCTCAAGC GCTGGCTGAT GCGTGAGGAG CCGGCCTGA
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| Protein sequence | MSGREQAERL WNNIIELGAR RLAALGIIGL TVFLAVGLGA YYLSRPAQET LYGGLSRDDV
GRIGSVLKDA NIPFDVSTDG TAVLVPYGHT AQARMLLAEK GLPQSSKSGY ELFNDLGSLG
LTSFMQEVTR VRALEGEIAR TIQTMKGVKA ARVHIVLPDR GSFRREQQPP SASVVVRTEP
ADDGSGAQAI RHLVASAIPG MKPERVTVIG TDGTLLLSGD DVGNAPTGKM ANLEKLVNRE
IQDNIRRTLT PYLGVGNFEV SVAARLNTDK TSTNETIFNP DQRVERSVKA TRETENSQNR
SSQRPTTAQQ NLPDQRTRSD GNDTSSTETQ KREDLTNYEI SSKTIQTVSD GYGIKQISVA
VLVNKSRLSS LAGPNAPPAA IDQQIGEIEQ LVASAAGFSK ERGDHVKVAA VGFVNDGAPL
EPVPPLSLTE VLMRQSATLI NAATILVVAS LLIWFGLRPA LRAILEVPAA EQEIAALAAE
GAAGAVPALP GAEAGSAAAG LLEGSPEAAA LAAAGGTPGP AQLGPPVMAS LIDDLTNRMN
SSPQKKLEQM IEFDEEQAAN ILKRWLMREE PA
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