| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3206 |
|---|
| Symbol | |
|---|
| ID | 6134030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3549433 |
|---|
| End bp | 3551316 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641643394 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_001770046 |
|---|
| Protein GI | 170741391 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.184602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CCGTCATTCC CCCCAAAGGC CTGCCGCAGA GCGTGACCAC GGGACCGATC
GCCGGCTCCG TCAAGGTCTA TGCCAGTCCC GAGGGGCGGC CTGACATCCG GGTGCCGCTG
CGCGAGATCG CCCTCAGCGA TCCGGCCGAG GCGCCGGTGC GCGTCTACGA TCCCTCGGGC
CCCTACACGG AGAGCGACGC CAAGGTCGAC CTCGCGGCCG GCCTGCCCCA GCTGCGCGAT
CCCTGGATCG CCGGCCGCGG CTACGCCGCG GTGACGCCCC GCGCGGTCAA GCCGGAGGAT
AACGGCTTCG CGGCCGAGGA CAGGCTGGTC GCCCCCTGCC CGGCCGCGCG CACGATCCGC
AGGGCCGCTC CCGGCCAGAT GGTGACCCAG TACGAGTTCG CCCGGGCCGG GATCGTCACC
GAGGAGATGA TCTACGTCGC CCACCGGGAG AATCTCGGCC GCCGGGCGAT GCTGGACCAG
GCCGAGGCCA AGCTCGCCGA CGGCGAGAGC TTCGGCGCGG CGATTCCGCC CTTCATCACC
CCGGAATTCG TGCGCGACGA GATCGCCCGC GGCCGCGCCA TCATCCCGGC CAACATCAAC
CACACCGAAC TCGAGCCGAT GGCCATCGGC CGCAACTTCC TGGTCAAGAT CAACGCCAAT
ATCGGCAACT CGGCCGTGAC CTCCTCGGCG GCCGAGGAGG TCGAGAAGAT GGTCTGGGCG
ACCCGCTGGG GCGCCGACAC CGTCATGGAC CTGTCGACGG GCCGCAACAT CCACAACATC
CGCGGCTGGA TCCTGCGCAA CGCGCCGGTG CCGATCGGGA CCGTGCCGAT CTACCAGGCC
CTGGAGAAGG TCGGGGGCGA CCCGCTGAAA CTCGACTGGG AGGTGTTCAG GGACACGCTC
ATCGAGCAGG CCGAGCAGGG GGTCGACTAC TTCACCATCC ATGCGGGCGT GCGGCTCGCC
CACGTGCCGC TGACCGCGCG GCGGGTCACC GGCATCGTCT CGCGCGGCGG CTCGATCATG
GCCCGCTGGT GCCTCGCCGG CCACCGGGAA TCGTTCCTCT ACGAGCGGTT CGACGAGATC
TGCGAGATCA TGCGCGCCTA CGACGTCTCC TTCTCGCTCG GGGACGGCCT GCGGCCCGGC
TCGATCGCCG ACGCCAACGA CGCGGCGCAA TTCGCCGAGC TCGAGACCCT CGGCGAACTC
ACCAAGGTCG CCTGGGAGAA GGGCTGTCAG GTCATGATCG AGGGCCCCGG CCACGTGCCG
ATGCACAAGA TCAAGGTCAA CATGGAGAAG CAGCTGCGCG AGTGCGGCGA GGCGCCGTTC
TACACGCTCG GGCCGCTGAC CACCGACGTG GCGCCCGGCT ACGACCACAT CACCTCCGGC
ATCGGCGCGG CGATGATCGG CTGGTACGGC ACCGCGATGC TCTGCTACGT GACCCCCAAG
GAGCATCTCG GCCTGCCGAA CCGCGACGAC GTGAAGACCG GCGTCATCAC CTACAAGATC
GCCGCCCACG CCGCCGACCT CGCCAAGGGC CACCCGGCCG CGCAGCTGCG CGACGACGCC
CTGTCCCGGG CCCGGTTCGA CTTCCGCTGG GAGGACCAGT TCAACCTCTC CCTCGACCCG
GACACGGCCC GCGCCTACCA CGACGAGACG CTGCCCAAGG ACGCCCACAA GGTCGCGCAT
TTCTGCTCGA TGTGCGGCCC GAAATTCTGC TCGATGAAGA TCACGCAGGA CCTGCGGGCG
GACGTGCTGG CCATGGAGGC GGCCGGCACC GTGGTGGGCG CCGCCCCCGC GATGAGCGAG
GCGGACCGGG CGGCCGGCAT GGCGGCCAAG TCGGCCGAGT TCCTGGCCGA GGGCGGCAAG
CTCTACGTCG ACGCCGCGGA GTGA
|
|---|
| Protein sequence | MNAPVIPPKG LPQSVTTGPI AGSVKVYASP EGRPDIRVPL REIALSDPAE APVRVYDPSG
PYTESDAKVD LAAGLPQLRD PWIAGRGYAA VTPRAVKPED NGFAAEDRLV APCPAARTIR
RAAPGQMVTQ YEFARAGIVT EEMIYVAHRE NLGRRAMLDQ AEAKLADGES FGAAIPPFIT
PEFVRDEIAR GRAIIPANIN HTELEPMAIG RNFLVKINAN IGNSAVTSSA AEEVEKMVWA
TRWGADTVMD LSTGRNIHNI RGWILRNAPV PIGTVPIYQA LEKVGGDPLK LDWEVFRDTL
IEQAEQGVDY FTIHAGVRLA HVPLTARRVT GIVSRGGSIM ARWCLAGHRE SFLYERFDEI
CEIMRAYDVS FSLGDGLRPG SIADANDAAQ FAELETLGEL TKVAWEKGCQ VMIEGPGHVP
MHKIKVNMEK QLRECGEAPF YTLGPLTTDV APGYDHITSG IGAAMIGWYG TAMLCYVTPK
EHLGLPNRDD VKTGVITYKI AAHAADLAKG HPAAQLRDDA LSRARFDFRW EDQFNLSLDP
DTARAYHDET LPKDAHKVAH FCSMCGPKFC SMKITQDLRA DVLAMEAAGT VVGAAPAMSE
ADRAAGMAAK SAEFLAEGGK LYVDAAE
|
|---|
| |