Gene M446_3185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3185 
Symbol 
ID6134072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3524336 
End bp3525370 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID641643373 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001770025 
Protein GI170741370 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00609082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTTACA AGGTCGCCGT CGTGGGAGCC ACCGGCAATG TCGGCCGGGA GATGCTGGAC 
ATCCTGGCGG AGCGCGCCTT CCCGGCCGAT ACGGTCGTGG CGCTGGCCTC GCGCCGCAGC
CTGGGCCAGG AGGTCTCCTT CGGCGACAGG ACGCTGAAGG TCCAGGCCCT CGACCAGTAC
GACTTCTCCG ACACGGACAT CTGCCTGATG TCGGCGGGCG GCGAGACCTC GAAGGAATGG
TCGCCGCGGA TCGGCGCGCA GGGCTGCGTG GTGATCGATA ATTCCTCGGC CTTCCGCTAC
GATTCCGACG TGCCGCTGAT CGTGCCGGAG GTGAACGCGG ACGCGGTCGT CGGCTTCTCG
AAGAAGAACA TCATCGCCAA CCCGAACTGC TCGACCGCGC AGCTCGTGGT GGCGCTGAAG
CCGCTGCACG ACGCCGCCAC CATCAAGCGC GTCGTCGTCG CCACCTACCA GTCGGTCTCC
GGCGCCGGCA AGGACGCCAT GGACGAGCTG TTCAACCAGA CCCGCGCCGT CTTCACGGCC
GGCGAGGTCA AGGTCCAGAA GTTCACCAAG CGGATCGCCT TCAACGTCAT CCCCCACATC
GACGTCTTCA TGGAGGACGG CTCCACCAAG GAGGAGTGGA AGATGGTGGC CGAGACCAAG
AAGATGCTGG ATCCCAAGAT CAAGCTGACG GCGACCTGCG TGCGGGTGCC GGTGTTCATC
GGCCATTCGG AGGCGGTGAA CGTGGAGTTC GAGCGGCCGA TCAGCGCCGA GGAGGCGCGC
GAGATCCTGC GCTCGGCGCC CGGCGTGCTG GTCGACGACA AGCGCGAGCC GGGCGGCTAC
ATCACGCCCC ACGAGGCGGC GGGCGAGGAC GCGACCTACG TGTCGCGCAT CCGCGAGGAC
ATCACGGTCG AGAACGGCCT GTCCTTCTGG TGCGTCTCCG ACAACCTGCG CAAGGGCGCG
GCGCTGAACA CGGTCCAGAT CGCCGAGGTG CTGATCAACC GCAAGCTGAT CAGCCCGAAG
AACAAGGCGG CCTGA
 
Protein sequence
MGYKVAVVGA TGNVGREMLD ILAERAFPAD TVVALASRRS LGQEVSFGDR TLKVQALDQY 
DFSDTDICLM SAGGETSKEW SPRIGAQGCV VIDNSSAFRY DSDVPLIVPE VNADAVVGFS
KKNIIANPNC STAQLVVALK PLHDAATIKR VVVATYQSVS GAGKDAMDEL FNQTRAVFTA
GEVKVQKFTK RIAFNVIPHI DVFMEDGSTK EEWKMVAETK KMLDPKIKLT ATCVRVPVFI
GHSEAVNVEF ERPISAEEAR EILRSAPGVL VDDKREPGGY ITPHEAAGED ATYVSRIRED
ITVENGLSFW CVSDNLRKGA ALNTVQIAEV LINRKLISPK NKAA