| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3182 |
|---|
| Symbol | |
|---|
| ID | 6131563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3520804 |
|---|
| End bp | 3522147 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641643370 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_001770022 |
|---|
| Protein GI | 170741367 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.155931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0201229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAAAG CGTTCGTCAA ATCCTACGGC TGCCAGATGA ACGTCTACGA CGCGGCCCGG
ATGGTCGACC TCCTCGGCCG CGAGGGCTTC GCCGAGACGG AGGCGATGGA GGAGGCGGAC
GTCGTCATCC TCAACACCTG CCACATCCGC GAGAAGGCGG CCGAGAAGGT CTATTCCGAA
CTCGGCCGGG TGCGGGACCT GAAGGGCGAG CGGGCCGGGG CGGGGCGCGA GACCACGATC
GTGGTGGCGG GCTGCGTGGC GCAGGCGGAG GGCCGCGAGA TCATCCACCG GGCCCCCGCC
GTCGACGTGG TGGTGGGACC CCAGAGCTAC CACCGGCTGC CGGAGCTCCT GGCCCGCGCC
CGGGACGGCA AGGTCGTCGA CACCGAGTTC CCCCTCGACG ACAAGTTCGA CCACCTGCCC
CCGCGCCGCG TCGCCGGTCC CTCCGCCTTC CTCACCGTGC AGGAGGGCTG CGACAAGTTC
TGCGCCTTCT GCGTCGTGCC CTACACGCGG GGGGCGGAGG TGTCGCGGCC CGTGGCGAAG
ATCCTCGCCG AGGCCGAGCG GCTGGCCGCG GGCGGCGCGC GGGAACTCAC CCTGATCGGC
CAGAACGTGA ACGCCTTCCA CGGCGAGGGG CCGGACGGGC GCCCGTGGTC CCTCGGGCGC
CTGATGCGCC GCCTCGCGGA GGTGCCGGGC ATCGCGCGGC TGCGCTACAC GACCAGCCAC
CCGCGGGACA TGGACGACGA CCTGATCGCG GCCCACCGGG ACTGCCCGGC GGTGATGCCC
TACCTGCACC TTCCGGTGCA GTCGGGCTCC GACCGCATTC TGGCGGCCAT GAACCGCCGG
CACGACGCGG ACACCTACCG GCGGCTGATC GACCGGATCC GGGCGGCGCG GCCGGACATC
GCCCTCACCT CCGACTTCAT CGTCGGCTTC CCGGGCGAGA CCGACGCGGA CCACGCCGAG
ACGATGCGGC TCGTGGCGGA GATCGGCTTC TCGGGCGCCT TCTCGTTCAA GTACAGCCCG
CGCCCGGGCA CGCCCGCGGC GGAGAGCGCC GACGCGGTGC CGGAGGCGGT CAAGCGCGAG
CGCCTCGCCG CGTTGCAGGC GCTGATCGAC GGGCAGGCCC GGGCCTTCAA CCTCGCCAGC
CTCGGCCGCA CGGTCGAGGT GCTGATCGAG AAGCCCGGCC GTCATCCGGG CCAGGTCGCC
GGCAAGTCGC CCTACCTCCA GGCGGTGCAG ATCGAGGCGG AGCCGGCGGT GATCGGGACG
ATCCTGCCGG TGCGCCTCAC CCGCGCCGGA TCGAACAGCC TGTTCGGGGA ACGGGCCGAG
GCGGCCCCGG CCGCCGCAGC ATAG
|
|---|
| Protein sequence | MKKAFVKSYG CQMNVYDAAR MVDLLGREGF AETEAMEEAD VVILNTCHIR EKAAEKVYSE
LGRVRDLKGE RAGAGRETTI VVAGCVAQAE GREIIHRAPA VDVVVGPQSY HRLPELLARA
RDGKVVDTEF PLDDKFDHLP PRRVAGPSAF LTVQEGCDKF CAFCVVPYTR GAEVSRPVAK
ILAEAERLAA GGARELTLIG QNVNAFHGEG PDGRPWSLGR LMRRLAEVPG IARLRYTTSH
PRDMDDDLIA AHRDCPAVMP YLHLPVQSGS DRILAAMNRR HDADTYRRLI DRIRAARPDI
ALTSDFIVGF PGETDADHAE TMRLVAEIGF SGAFSFKYSP RPGTPAAESA DAVPEAVKRE
RLAALQALID GQARAFNLAS LGRTVEVLIE KPGRHPGQVA GKSPYLQAVQ IEAEPAVIGT
ILPVRLTRAG SNSLFGERAE AAPAAAA
|
|---|
| |