Gene M446_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3141 
Symbol 
ID6135099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3475115 
End bp3476908 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content78% 
IMG OID641643329 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_001769981 
Protein GI170741326 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0346516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCCC TGATCGACCT TCCCCGCCCG CTCCTCGACG TCCACCGCTC GGTGCTCGGC 
CGGCCCTGGC GCGAGCGCTG CGCGGACGGC CCGCCCCAGC AGGCGGCCGC GACCATCGCC
CAGAGCCACG GCCTGCCGGA GGTGCTGGCG CGGGTGCTGG CCGGGCGGGG CGTCGCGCCG
CGGGACGTGC CGCTCTTCCT GGAGCCGCGC CTGCGCGACC TGATGCCGGA CCCGGCCGTG
CTCCTCGACA TGGAGGCGGC CGCCGACCGG CTCGCCCACG CGGTGCTGCG GCGCGAGAAG
GTCGCGATCT TCGGCGATTA CGACGTCGAC GGCGCGGCGA GCGCCGCGCT CCTCGCCGGC
GCCCTGCGCG ACCTCGGCGT GCCGTACCGG CTCCACATCC CGGACCGGAT CACCGAGGGC
TACGGGCCGA ACGTCGAGGC GGTGCGCGTG CTGGCCGGGG AGGGCGCGCG CCTCCTCGTC
ACGGTCGATT GCGGCACGGC CGGCCACGCG CCCCTGGCCG AGGCGGCGCG GCTCGGGCTC
GACGTGATCG TCCTCGACCA TCACGGCGCG CCCGAATCCC TGCCGCCCGC CCGGGCGGTG
GTGAATCCGA ACCGGCTCGA CGACCTCTCG GGCCTCGGCC ACCTCTGCGC GGCCGGGGTG
GTGTTCCTCA CCCTCGTGGC CCTCAAGCGC CGGCTGCGCC GCGACGGCGT CGACCTGCCC
GACCTGATGA CCGGGCTCGA CCTCGTGGCC CTCGCCACCG TGGCGGACGT GGTGCCGCTC
GCCGGGCTCA ACCGGGCCTT CGTGCGCCAG GGGCTCGCGG TGATGCGGGG CCGCGGGCGC
CTCGGCCTCG CGGCCCTCCT CGACGCGGCC GGCCTCGGGG AGCCGCCCCA GGCCTGGCAT
CTCGGCTTCC TGGTCGGGCC GCGCATCAAT GCGGGCGGGC GCATCGGCGA CGCGACGCTC
GGCGCGCGCC TCCTCCTCTG CGAGGACCCG ATCGAGGCGG CCGGCATCGC CGCGCAGCTG
GATCAGCTCA ACCGCGAGCG GCAGGCGATC GAGGCCGCCG CCGTGGCCGA GGCCGAGGCG
CTGACGGCCC TTCGCCTGGA GCGCGAGCCC GACCAGGCGG TCATCGTGAC CGGCAGCCCC
GACTGGCATC CGGGGGTGGT CGGGCTGATC GCGGCGCGCC TCAAGGAGCG CTTCGGCCGC
CCGGCCTTCG CCTTCGCCCT GCGCCAGGAC GGCAGCGCGA CCGGGTCGGG CCGCTCCATC
GTCGGCGCCG ATCTCGGGCG GGCGGTGCGC CGCGCCGTCG AGTGCGGCCT CGCCGCCAAG
GGCGGGGGCC ACGCCATGGC GGCGGGCGTC ACCATCGCTG CCGTCGACCT CGACCGGTTC
CGCGACGCGC TTGCCCGGGA CCTCGCCGCG TCGGTGGGCG AGGCGCGCGC CGCCGAGGCG
CTGTTGATCG ACGGGACGCT GTCGGCCGGC GGCGTGCAGC CCGACCTGAT CGCCGCCCTG
GAGCGCGCCG GACCCTTCGG CCAGGGCGCG CCCGAGCCGG TCTTCGCGCT GGCCCGCCAC
CGCGTCGCCG ACGCGCGGAT GGTCGGCACC GGGCACGTGA AGGTGCAGCT GCGCGGGCGC
GACGGCGTCA CGGTCCCGGC CATCGCCTTC CGGGCCGCCG AGGGGCCGCT GGGCCGGTTC
CTGCTGCGGG GCATCGGCCG CGACATCCAC GCCGCGGGCA CGCTCGCCCG CGACCGCTGG
CGGGGCAGCG AGCGCGTCCA GCTCCGCCTG TGCGACGCCG CCGAGGCGAC CTGA
 
Protein sequence
MTALIDLPRP LLDVHRSVLG RPWRERCADG PPQQAAATIA QSHGLPEVLA RVLAGRGVAP 
RDVPLFLEPR LRDLMPDPAV LLDMEAAADR LAHAVLRREK VAIFGDYDVD GAASAALLAG
ALRDLGVPYR LHIPDRITEG YGPNVEAVRV LAGEGARLLV TVDCGTAGHA PLAEAARLGL
DVIVLDHHGA PESLPPARAV VNPNRLDDLS GLGHLCAAGV VFLTLVALKR RLRRDGVDLP
DLMTGLDLVA LATVADVVPL AGLNRAFVRQ GLAVMRGRGR LGLAALLDAA GLGEPPQAWH
LGFLVGPRIN AGGRIGDATL GARLLLCEDP IEAAGIAAQL DQLNRERQAI EAAAVAEAEA
LTALRLEREP DQAVIVTGSP DWHPGVVGLI AARLKERFGR PAFAFALRQD GSATGSGRSI
VGADLGRAVR RAVECGLAAK GGGHAMAAGV TIAAVDLDRF RDALARDLAA SVGEARAAEA
LLIDGTLSAG GVQPDLIAAL ERAGPFGQGA PEPVFALARH RVADARMVGT GHVKVQLRGR
DGVTVPAIAF RAAEGPLGRF LLRGIGRDIH AAGTLARDRW RGSERVQLRL CDAAEAT