Gene M446_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3128 
Symbol 
ID6129330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3463323 
End bp3463991 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID641643318 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001769971 
Protein GI170741316 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0272486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCT CCCTCAACGC GAACCACCTG CTCTTCCTCG GCCAGGGTGC GCTCTGGACG 
ATCGGATTGT CGCTCATCGC CCTCGTCGGC GGCGGCGCGC TCGGCTTCGT CATCGCCCTG
TGCCGCATCT CGGCTCTGCG CGCGGTGCGC TTCGCCAGCG GCGCCTACGT CCAGCTCATC
CAAGGCACGC CGCTCCTCGT CATCATGTTC CTGACCTTCT TCGGCCTGCC GCCGCTGGGT
CTGAGGGTGT CGCCGCTCAC CGCGGCCGGC GCCTCGCTGA CGATCTACGT CGGGGCCTAC
CTCGGCGAGA TCTGGCGCGG TGCCATCCAG TCCGTGCCGC GCCCGCAATG GGAAGCGGCC
GAGGGACTCG CCCTCTCGCG CGCCCAGCGC ATGACGAAGG TCATCCTGCC CCAGGCCGTG
CGCATCGCGA CCCCGCCAAC CGTCGGCTTC ATGGTGCAGA TTGTGAAGAA CACCTCGCTC
GCCTCAGTGG TCGGCTTCGT CGAATTGGCT CGCGCGGGCC AGATCATCAA TAATTCCCTG
TTCGAACCCT TTCTGATCTA CGCAATCATC GCGGCCGTGT ACTTCGCCAT GTGCTTTCCC
CTGTCGCGGC TCAGCCAGCG ACTCGAGAGG CGAGGCGCGC GCGGCCGCAC CACCCTGATG
CCGGCCTGA
 
Protein sequence
MSGSLNANHL LFLGQGALWT IGLSLIALVG GGALGFVIAL CRISALRAVR FASGAYVQLI 
QGTPLLVIMF LTFFGLPPLG LRVSPLTAAG ASLTIYVGAY LGEIWRGAIQ SVPRPQWEAA
EGLALSRAQR MTKVILPQAV RIATPPTVGF MVQIVKNTSL ASVVGFVELA RAGQIINNSL
FEPFLIYAII AAVYFAMCFP LSRLSQRLER RGARGRTTLM PA