Gene M446_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3127 
Symbol 
ID6129329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3462630 
End bp3463313 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID641643317 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001769970 
Protein GI170741315 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0256845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCTCG ACCTCGACTT CGGCGCCGTC CTCGAACGGT GGCCGAGCTT CCTCGACGGT 
GCGCTGCTCA CCCTTGAACT CTCCGGCATT GCGACGGCAG TCGGCGGCGC GCTCGGCGGG
ATCACGGCGA TCGGCCGCAG GAGCCGGCAC GCGGCATTGC GCCGCCTCTG CGAGGTCTAC
GTCGAAGCGA TCCGCAACAC GCCGCTCCTC GTCCAGATCT TCCTCGTCTA CTTCGGCCTC
GCGAGTCTCG GCTTCCGCTT CTCGGCCCTA ACCGTCGCCG CGCTCGCACT CACCATCAAC
GTCGGCGCCT ACACCACCGA GATCGTGCGC GCCGGGCTCG ACGCGATCCC CCGCGGCCAG
ATCGAGGCGG CGGAGGGTCT CGCCCTGTCG CGCGCGCAGA TCTATCGGCA CGTCGTGCTG
CTACCCGCGA TCGAGCGGGT CTATCCCTCG CTCACGAGCC AGTTCGTGCT CCTGATGCTC
GCCTCCTCCG TGACCTCGCA GATCTCGGCC GAGGAACTGA CGGCGGTGGC GAACTACATC
CAGTCCGACA CGTACCGGGC CTTCGAGACC TACATCGTGG TGGCGCTGAT CTACGTCGCG
CTCTCCTTCA TCATGCGTGC GGGCTTCTGG GGGCTGGGTC TCGTCCTGTT CCCGCGGCGG
CGACGCCTCG GTACCCCGCT GTGA
 
Protein sequence
MSLDLDFGAV LERWPSFLDG ALLTLELSGI ATAVGGALGG ITAIGRRSRH AALRRLCEVY 
VEAIRNTPLL VQIFLVYFGL ASLGFRFSAL TVAALALTIN VGAYTTEIVR AGLDAIPRGQ
IEAAEGLALS RAQIYRHVVL LPAIERVYPS LTSQFVLLML ASSVTSQISA EELTAVANYI
QSDTYRAFET YIVVALIYVA LSFIMRAGFW GLGLVLFPRR RRLGTPL