| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3125 |
|---|
| Symbol | |
|---|
| ID | 6129327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3460947 |
|---|
| End bp | 3461693 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641643315 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_001769968 |
|---|
| Protein GI | 170741313 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.062959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTG CTCGCCCCAA TGAGGGTCGG TCCGGCTTCG AAGTCGTCTT CGCGTTCCTG
CGCGAGCGGC TGCTGGCCGG TGCCCTGCGC CCCGGCGATC GCTTGATCCC GGAGCGCGAA
CTGGCCGCTC AGCTGGGCGT CAGTCGACCG ATCGTCCGCG AGGCGCTGCG CGCACTCACC
GCGCTCGGCA TCGTGGAAAT CCGGGAGCGC ATGGGGACCA TCGTCCGCAA GCCAGACGTC
ACCGTCCTCA ACGACTTCTT CGCCTTCGCG CTCGCCCAGC AGGACGGGCT CGCGGACGAC
GTCATGCAGG CGCGCATCGC CGTCGAATGC CAATCGATCC GGCTCGCGTG TCAGAACGCG
ACCGTCTCGG ACCTCGAGCG CCTGCAGCGG GCGCTGCAGC GAATCGTCGA GACCATCGAC
GACCCCGAGG CAGGCGGCGC GGCCGACTAC GCCTTTCATC GCGCGATCGT GGCCGCGGGA
GGCTCCAGCA CCCTCGGCGT GCTGCACGAC TCCATGGCGC ATGTCCTGAT GCGCTCGCAC
GTCGACCGGC GCCGCCTCGT GCAGGTCGTC GAACCCATGC GGTCCTACCT CATTGAGGAC
CACCGCCGGA TCTTCGACGC CATCGCCGCC CGAGACCCGG CGCGGGCGGA CGCGGTTCTG
CGCGAGCACT TCGCGATCGG GGACGGCTTG CGACGGCAGG CAGCACTGGC CGCCTCCGCG
CACGTGAGCG CCGCGAGGGC CGGCTGA
|
|---|
| Protein sequence | MEIARPNEGR SGFEVVFAFL RERLLAGALR PGDRLIPERE LAAQLGVSRP IVREALRALT
ALGIVEIRER MGTIVRKPDV TVLNDFFAFA LAQQDGLADD VMQARIAVEC QSIRLACQNA
TVSDLERLQR ALQRIVETID DPEAGGAADY AFHRAIVAAG GSSTLGVLHD SMAHVLMRSH
VDRRRLVQVV EPMRSYLIED HRRIFDAIAA RDPARADAVL REHFAIGDGL RRQAALAASA
HVSAARAG
|
|---|
| |