Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3077 |
Symbol | |
ID | 6134555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 3404804 |
End bp | 3406411 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641643268 |
Product | alpha amylase catalytic region |
Protein accession | YP_001769921 |
Protein GI | 170741266 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0346516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGGTG AACTCTGGTG GAAGGCCGGG ACGGTCTACC AAATCTATCC CCGCTCCTTC CAGGACGCGA ACGGCGACGG GGTCGGCGAC CTCAAGGGCA TCACCGCCCG GCTCGACTAC CTCGCCTGGC TCGGGGTCGA CGCGCTCTGG CTCTCGCCGG TCTGCCGCTC GCCGATGGCC GATTACGGCT ACGACGTCTC CGATTACTGC GACATCGACC CGCTCTTCGG CACGCTCGCG GATTTCGACG CGCTCGTCGC CGAGGCGCAC CGGCGCCGCC TGCGGGTGAT CATGGATTTC GTGCCCAACC ACACCTCGAT CGCGCATCCG TGGTTCCGCG AGAGCCGCGC CTCCCGCGAC AACGCGCGGC GCGACTGGTA CATCTGGCGC GACCCGAAGC CCGACGGCGC GCCCCCCAAC AACTGGGTGG GCAATTTCGG CGGGCCGGCC TGGACCCTCG ACCCGGCCAC CGGTCAGTCC TACTACCACG CCTTCCTGAA GGAGCAGCCC GACCTCAACT GGCGCAACCC GGAGGTGCGC CGGGCCATGC TGGACGTGCT GCGCTTCTGG CTCGACCGCG GCGTCGACGG GTTCCGGGTC GACGTGATCT GGCACCTGAT CAAGGACGCC GCGCTGCGGG ACAACCCGCC GAACCCCGAC TACGTCCCGG GCGACGCCGA GATCAACAGC CTCACGCCCC TCTACTCCGC CGACCAGCCG GAGGTGATGG AGGTCGTCGC CGAGATGCGC GCGGTGCTCG ACGGCTACGA CGAGCGGGTG CTGATCGGCG AGATCTATCT GCCGCTGGAG CGGCTGATGG CCTATTACGG CGTCGACCTG TCCGGCGCGC ACCTGCCGTT CAACTTTCAG TTGATCCAGG CCCGCTGGCA CGCCGAGACG ATCGCCGCGC TCGTCGCCGA GTACGAGGCG GCCCTGCCGG AGGGCGGCTG GCCGAACTGG GTGCTCGGCA ACCACGACCA GCCGCGCATC GCCGCCCGCG TCGGGGCCGC GCAGGCCCGG GTCGCCGCGG TGCTGCTCCT CACCCTGCGG GGCACGCCGA CGCTCTATTA CGGCGACGAG ATCGGGCTCG CCCGCGTGCC GATCCCGCCC GGGCGGGCGC GCGACCCCTG GGAGCGCAAC GAGCCCGGCC GCGGCCGCGA CCCGGCGCGC ACGCCGATGC AGTGGGACCG CACGCCCCGG GCGGGGTTCT CCAGCGCCGA GCCGTGGCTG CCGCTCGATC CCGGGGCCGC GACCTGCAAC GTCGAGGTGC TGCGCGACGA TCCCGGCTCG ATCCTCACCC TCTACCGCCG CCTCCTGGCC CTGCGGCGCG AGCACGCCGC CCTGAGCCTC GGCCTCTACC GGGCGGTCTT TGTCGCGCGG GACGTCCTCG TCTACGAGCG CGCGCACGGG GACGAGGTCC TGCGCATCCT CCTGAATTTC GGGCACGCCC CTTGCACCGT GCCGCTGCCG CCGGATCACG CCTGGCGCGT CCTGCTGTCG AGTTCGGGCA GCCGCATCGC CGAGAGGCCG GCCGACGGCC ATCTCGCACT CGCGGGAGAC GAGGCCCTCG TCCTCCTGAG GGAGCCGCTT TCACCCGAAA ATGTCTAG
|
Protein sequence | MPGELWWKAG TVYQIYPRSF QDANGDGVGD LKGITARLDY LAWLGVDALW LSPVCRSPMA DYGYDVSDYC DIDPLFGTLA DFDALVAEAH RRRLRVIMDF VPNHTSIAHP WFRESRASRD NARRDWYIWR DPKPDGAPPN NWVGNFGGPA WTLDPATGQS YYHAFLKEQP DLNWRNPEVR RAMLDVLRFW LDRGVDGFRV DVIWHLIKDA ALRDNPPNPD YVPGDAEINS LTPLYSADQP EVMEVVAEMR AVLDGYDERV LIGEIYLPLE RLMAYYGVDL SGAHLPFNFQ LIQARWHAET IAALVAEYEA ALPEGGWPNW VLGNHDQPRI AARVGAAQAR VAAVLLLTLR GTPTLYYGDE IGLARVPIPP GRARDPWERN EPGRGRDPAR TPMQWDRTPR AGFSSAEPWL PLDPGAATCN VEVLRDDPGS ILTLYRRLLA LRREHAALSL GLYRAVFVAR DVLVYERAHG DEVLRILLNF GHAPCTVPLP PDHAWRVLLS SSGSRIAERP ADGHLALAGD EALVLLREPL SPENV
|
| |