| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3062 |
|---|
| Symbol | |
|---|
| ID | 6135823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3389171 |
|---|
| End bp | 3389938 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641643253 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001769907 |
|---|
| Protein GI | 170741252 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.515672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0696546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGTC TCTCCGGCAA GGTCGCGCTC GTCACCGGCG GCGCCCGCGG GATCGGGCTC
GCGACCGCGC GGCGCTTCGC CGAGGAGGGC GCCGCCGCGG TGATCCTCGC CGACATCGAC
GCCGAGGCCG GCGCCCGGGC CGCCGCGACG AACCCGGTCT TCCGCTTCGC GCCCCTCGAC
GTGACGCAGG ACGCGGCGTG GCAGGACGCC ACCGACGAGG CGGTCGCGCG CGAGGGCGGG
CTCGACGTCG TCGTCAACTG CGCCGGCATC GCGGTCGTGG CGACGATCGA ATCCGTGACG
CTGGAGCAGT GGCGCCGGGT GCAGGCCGTC AACGTCGACG GCACGTTCCT GGGCTGCCGC
CACGCGGTCC GGGTGATGAA GCCGCCCGCG GGCCGCGGCG GGGCGATCAT CAACCTGTCC
TCGGTCTCCG GCATCATCGG CGGCCACAAC CTCGCCGCCT ACAACGCCTC CAAGGGGGCG
GTGCGGCTAC TGACCAAGTC GGTGGCCCTG CACTGCGCCC GGCAGGGCTA CGGGATCCGC
TGCAACTCGA TCCATCCGGG CTTCACCGAG ACCGACATGC TGCACGACCT CGCGGCGGGC
GGGCGGGACC CGGAGGTCCT GCGCGAGCGC CTGCGCGCCT CGGTTCCCCT CGGCCGCAAC
GCCCGGGCCG ACGAGATCGC CGCGCTCGCC GCCTACCTGG CGGCGGACGA ATCCGGCTTC
GTCACCGGCG CCGAGCTCGT CATCGACGGG GGCGTCACCG CGCAGTGA
|
|---|
| Protein sequence | MRRLSGKVAL VTGGARGIGL ATARRFAEEG AAAVILADID AEAGARAAAT NPVFRFAPLD
VTQDAAWQDA TDEAVAREGG LDVVVNCAGI AVVATIESVT LEQWRRVQAV NVDGTFLGCR
HAVRVMKPPA GRGGAIINLS SVSGIIGGHN LAAYNASKGA VRLLTKSVAL HCARQGYGIR
CNSIHPGFTE TDMLHDLAAG GRDPEVLRER LRASVPLGRN ARADEIAALA AYLAADESGF
VTGAELVIDG GVTAQ
|
|---|
| |