Gene M446_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3023 
Symbol 
ID6129061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3344166 
End bp3345386 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID641643214 
Productputative UreA/short-chain amide ABC transporter 
Protein accessionYP_001769868 
Protein GI170741213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.040363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAAAA CGCTCCTAGC CGCCGCGTGC GTGGCCGCGT GGCACGGCGC GGCCTGCGCC 
CAGCAGGCCG CCCCGCCGGG CATCTCGGAC GGGGTCGTCC GGATCGGGTT CCTGCTCGAC
ATGTCGAGCG TCTACGCGGA CGTCACCGGG CCGGGCAGCG CCGCGGCGGC GCGCATGGCG
GTGGAGGATT TCGGCGGCAA GGTGCTGGGC GCGCCGATCG AGGTCCTGGT GGCGGACCAC
CAGAACAAGG CCGACATCGC CGCCGCGACC GCCCGGGCGT GGTTCGACAC CGAGAAGGTC
GACGCGATCC TCGACGTCGC CGCCTCCGCG ACGGCGCTCG CGGCGGCGGA CATCGCCAAG
GCCAAGCACA GGATCATCGC CTTCAGCGGG CCGGGGGCCG TGCGGCTCAC CAACGAGGCC
TGCTCGCCCG TCTCGATCCA CTGGGCCTAC GACACCTACG CGCTCGCCAA CGTGACGGCC
CAGGCCACCG TGAAGGCGGG GGGCGATTCC TGGTTCTTCA TCACGGCCGA CTACGCCTTC
GGGCACGACC TGGAGCGGGA CGCGGGGGCG GTCGTCCGGG CCCAGGGCGG CACCGTGGCG
GGGAGCGTGC GGGCCCCCCT CAACACCCCG GATTTCTCCT CGTTCCTGCT CCAGGCGCAG
GCCTCCGGCG CCAAGGTGGT CGGGCTCGCC AATGCGGGCC GCGACACCAC CAACGCCATC
AAGCAGGCCG CCGAGTTCGG CCTGACCCAG GGCGGCCAGA AGCTCGCCGG GCTCCTCGTC
TACATCAACG ACGTGCACAG CCTCGGCCTC GCCCCGACCC AGGGCATGCT GCTGACCGAG
GGCTTCTACT GGGACCTCGA CGAGGGCACG CGCGCCTTCT CGAAACGCTA CTTCGCCCGG
ACCGGCCGGA TGCCGAACAT GTCCCAGGCG GGGGTCTACT CGACGGTGAC GCACTACCTG
AAGGCCGTCG CCAAGGCCGG CACCGACGAG ACCGACGCGG TGATGCGGGC GATGCGCGAG
ACGCCGGTGG ACGATTTCTA CGCCCATGGC GGGCGCATCC GCGAGGACGG GCGCATGGTG
CACGACATGT ACCTGTTCGA GGTGAAGCGG CCCGGGGAAT CGACCGGCGA GTGGGACCTC
TACCGGCGCG TGGCGACCAT CCCGGGCGAT CAGGCCTTCC AGCCGCTCTC GGCCTCCCGC
TGCCCGCTGG TGAAGAAGTG A
 
Protein sequence
MRKTLLAAAC VAAWHGAACA QQAAPPGISD GVVRIGFLLD MSSVYADVTG PGSAAAARMA 
VEDFGGKVLG APIEVLVADH QNKADIAAAT ARAWFDTEKV DAILDVAASA TALAAADIAK
AKHRIIAFSG PGAVRLTNEA CSPVSIHWAY DTYALANVTA QATVKAGGDS WFFITADYAF
GHDLERDAGA VVRAQGGTVA GSVRAPLNTP DFSSFLLQAQ ASGAKVVGLA NAGRDTTNAI
KQAAEFGLTQ GGQKLAGLLV YINDVHSLGL APTQGMLLTE GFYWDLDEGT RAFSKRYFAR
TGRMPNMSQA GVYSTVTHYL KAVAKAGTDE TDAVMRAMRE TPVDDFYAHG GRIREDGRMV
HDMYLFEVKR PGESTGEWDL YRRVATIPGD QAFQPLSASR CPLVKK