Gene M446_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3000 
Symbol 
ID6129235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3319577 
End bp3321064 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content75% 
IMG OID641643191 
Productsignal transduction histidine kinase 
Protein accessionYP_001769846 
Protein GI170741191 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.262442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGGA GGATGCGATT GAGCGCCCCA TGGCCGCCCG GCGACGGCGA GATGAGCCGG 
CGCATCCGTG GGTACGACTG GGCCTCGACG CCGCTCGGAC CGGTCGAGGG ATGGTCGCCG
CCGCTGCGGA TCATGGTCGA GCAGGTGCTC GCCTGCGCGG CCGTGTCCTC GCTGGTCTGC
GGCCCCGCGC GCATCCTGAT CTACAACGAC GCGGCCGCCC GCCTGTACGG CGACCGACAC
CCGGCGGCGC TGGGCCGGCC GCTCCCGGAG GTGTTTCCGG AAGGCTGGGC GGTCGTCGCC
CCCTTCTACG CGCGCGCCTT CGCCGGCGAG AGCGTCGCCG TCGCGGCGCA GCCCCTCGAC
ACGCGCGGCG AGGGCGATCC GGGCGCGGAC GTGTTCGACG CCTTCCTGAC GCCGGTGCGC
GACGGCCCGA CCGTCGCGCA GGTCCACATG GTCGGCATCG AGGTCGGCAC CCGCGCGCGG
GCCGAGGCGG CTTTGCGCGA GAGCGAGGCC CGCCAGCGGG TCCTGATCGA GGGCATCCCG
CAGCTCATCT GGCGCTCGCG GGACGGCGGA CACTGGATCT GGTCCAGCCC GCAATGGAGC
GCCTTCACCG GCCTCTCGGC CGAGGCGAGC CGCGATCTCG GCTGGCTGGA AGCCCTGCAC
CCGGACGACC GGCAGGCGGC GGCCGCCGCC TGGGTCGACG CGGATTCCGG CGGCCCGCTG
ATGATGGAGA CCCGCATCTA CAACGCCTCC GAGGGGCGCC ACGGCTGGTT CGCGACCCGC
GCCGCGCCGG TGCGCACCGA GAGCGGCGCG GTGATCGAGT GGCTCGGTAC CTCGACGGAC
ATCGATCAGC TGCTGCGGCT GCGGGAGCGC CAGAGAGTGC TGGTGGCGGA ACTCCAGCAC
CGCACCCGCA ACCTGCTCGG CGTGGTCCGG GCGATCGCCG ACCGCGTGAT CCCGGGCGAG
GCCGCCCTCG CGGAGGTCCG CACGCGGTTC CACGACCGGC TCGCCGCGCT CGCGCGCGTG
AACGGCCTGC TCTCGCGCCT CGAGGACAGC GACCGGATCG CCTTCGACGC GCTCATCCGC
ACCGAGCTCG CCGGCCACGG CGTCGTGGTC GATGGGCGCG GCGGCCGGGT CGCGCTCGAG
GGACCGCGCG GCATCCCCCT GCGCTCGGCG ACGGTGCAGA CGCTCGCCCT GGGCTTGCAC
GAACTGGCCA CCAACGCGCT CAAATACGGG GCCCTGTCGC GGCCGGAGGG CCGCCTGAGC
GTGTCCTGGC AGGTGGTTCG GAGTGCGGGC GGCGCGCGGC TGCGGGTCGC GTGGCGGGAG
CGCGGCGTGA GGGTGCCGCT CGGAGCGGAC GGAGAGCCCC CGCGCCGCGG CTACGGCCTG
GAACTGATCG AGCGGGCGCT GCCCTATCAG CTCAGCGCCG AGGTCGCCTA CAGGCTCGGA
CCCGACGGCG TCGACTGCAC GATCATGCTG CCGCTCGCGC CCGGCTGA
 
Protein sequence
MRGRMRLSAP WPPGDGEMSR RIRGYDWAST PLGPVEGWSP PLRIMVEQVL ACAAVSSLVC 
GPARILIYND AAARLYGDRH PAALGRPLPE VFPEGWAVVA PFYARAFAGE SVAVAAQPLD
TRGEGDPGAD VFDAFLTPVR DGPTVAQVHM VGIEVGTRAR AEAALRESEA RQRVLIEGIP
QLIWRSRDGG HWIWSSPQWS AFTGLSAEAS RDLGWLEALH PDDRQAAAAA WVDADSGGPL
MMETRIYNAS EGRHGWFATR AAPVRTESGA VIEWLGTSTD IDQLLRLRER QRVLVAELQH
RTRNLLGVVR AIADRVIPGE AALAEVRTRF HDRLAALARV NGLLSRLEDS DRIAFDALIR
TELAGHGVVV DGRGGRVALE GPRGIPLRSA TVQTLALGLH ELATNALKYG ALSRPEGRLS
VSWQVVRSAG GARLRVAWRE RGVRVPLGAD GEPPRRGYGL ELIERALPYQ LSAEVAYRLG
PDGVDCTIML PLAPG