Gene M446_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2978 
Symbol 
ID6130872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3302489 
End bp3303193 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content75% 
IMG OID641643169 
Producthypothetical protein 
Protein accessionYP_001769824 
Protein GI170741169 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.140741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0506844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGAAT GGGTTCAACT CGATGCCGCC GCCATCCCGG GCGAGCGGGA GCCGATGCGC 
CTCATGCAGC GAGGCCACGA GTTCACGATC TGCGTCGGCC GGATCGAGCT GATGAGCAAC
CGCGCCTGCA CCTCCGAGGC GGCCCTCGCC GCCCTCGCCT GCGCCCGCCT GCGGGACCGC
CCGCGGGCCA GGGTGCTGAT CGGCGGGCTC GGCATGGGCT TCACGCTCCG GGCCGCGCTC
GACGCGCTCG GGCCGGACGC CCGGGTCGTC GTGGCGGAAC TGGTGCCGGC CGTGGTGGCC
TGGGCGCGCG GCCCGCTGGC CCACGTCTTC GCCGGGAGCC TCGACGATCC GCGGGTCGAG
CTGCGGGAGG ACGACGTCAA GCGCGTGATG CAGCAGGGGC AGGCGGATTA CGACGCGATC
CTGCTCGACG TCGACAACGG CCCCGAGGCG CTGACGCGGG TGGAGAACGA CCGCCTCTAC
GACAGCTGGG GCCTGAGGCG GGCGCGCTAC GCCCTGCGCT CGAGCGGCGT CCTCGGCGTC
TGGTCCGGCG GGCCCGACCG GCGCTTCAAG GCCCGCCTGC GCAACACGGG CTTCGCCGTG
GAGGAGGTCC GCGTGCACGC GAACGGCCGC AGCGGCCGCC GTCACGTCGT CTGGCTCGCC
ACGCCCTCGG AGACCGGGAC GCCGTTCTGC TGGCCCGCGC CGTGA
 
Protein sequence
MTEWVQLDAA AIPGEREPMR LMQRGHEFTI CVGRIELMSN RACTSEAALA ALACARLRDR 
PRARVLIGGL GMGFTLRAAL DALGPDARVV VAELVPAVVA WARGPLAHVF AGSLDDPRVE
LREDDVKRVM QQGQADYDAI LLDVDNGPEA LTRVENDRLY DSWGLRRARY ALRSSGVLGV
WSGGPDRRFK ARLRNTGFAV EEVRVHANGR SGRRHVVWLA TPSETGTPFC WPAP