Gene M446_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2809 
Symbol 
ID6134562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3119432 
End bp3120448 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID641643016 
Productintegrase family protein 
Protein accessionYP_001769674 
Protein GI170741019 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TTCGAAAGCG CGGCACATCC TGGCAGGCTC AGGTCCGACG CGACGGCTTT 
CCTCCCCTAT CCAGATCCTT CCGCACCAAG GCCGAGGCTG TGGCGTGGGG CCGGGACAGG
GAACGCGAGA TTGAAGGCGG CAGCCTCAGC GTTGCCACTC GTGAACCCAA GGGGCTGACG
GTCGCAGAAA TTCTCAGGCG CTACCAGGCG GCCGTCAGCT GCAAGAAGCG AGGCGCGAGG
TCGGAGCGAT CGCGGATCGG AACTCTCCAG GCCCACCCGA TCGGTCAGGC ACAGGTGCGA
AGGCTGTCCG CTTCGATGGT GGCCCGCTAT CGGGATGATC GGCTGGAGAT CGTCGCCGGG
GACTCCGTCC GTCGCGAGTT GACCATCCTT CGTCACTGTC TGGAGGTGGC TCGCCGGGAG
TGGGGCATTC CACTACCCTC GAATCCGGTA GGGCAAATCA AACTCCCCGA GCCGTCAAAG
GGGCGTCAGC AGCGACTGGA AGCGGAACAG GCGCAGGCTC TCATCCTGGC GCTGAAACGG
TCTCGCGTCT GGTACCTTCG ACCACTCGTT AACCTCGCGA TCGAAACGGG CATGAGGAGG
GGTGAGCTCC TGACTCTCAG GTGGGCCAAC GTGGACCTAT CAAGTCGAAT TGCATATCTC
GAAACGACCA AGAATGGGCA CTCCAGGACC ATCCCACTGA GCCCAGGAGC GCTGAGTGTG
CTGAAGGGAT TGCCAAGGAC GGACGCGCGC GTGTTTCCCT TGACCGGCAA TGCTGTAAGG
CTTGCGTGGG AACGCCTAAG AAACCGAGCC GGACTACCAG AACTAAGATT TCACGATCTG
CGACATGAAG CGATTTCACG GTTCTTCGAA ATAGGCCTGA GCATACCAGA GGTCGCCCTG
ATCAGTGGTC ACCGGGATAC TAGAACGCTG ATGCGGTATA CCCACCTGAG GCCGGAGGTA
CTCGCTAAGA AGTTGCAGCA AGCCAGGGAT GTCGGTCAAT CAGGCGCTTC GGAATAG
 
Protein sequence
MATIRKRGTS WQAQVRRDGF PPLSRSFRTK AEAVAWGRDR EREIEGGSLS VATREPKGLT 
VAEILRRYQA AVSCKKRGAR SERSRIGTLQ AHPIGQAQVR RLSASMVARY RDDRLEIVAG
DSVRRELTIL RHCLEVARRE WGIPLPSNPV GQIKLPEPSK GRQQRLEAEQ AQALILALKR
SRVWYLRPLV NLAIETGMRR GELLTLRWAN VDLSSRIAYL ETTKNGHSRT IPLSPGALSV
LKGLPRTDAR VFPLTGNAVR LAWERLRNRA GLPELRFHDL RHEAISRFFE IGLSIPEVAL
ISGHRDTRTL MRYTHLRPEV LAKKLQQARD VGQSGASE