Gene M446_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2752 
Symbol 
ID6135086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3061868 
End bp3062965 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content77% 
IMG OID641642965 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001769624 
Protein GI170740969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.239628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCC CCTTGGTGAC CCCGATCCGC CTCGCCGCCG CCCTCGGCTG GCTCGCCCTC 
GCGGGCTGCG ACGAGCAGAA GGCGCCGGCC GCGGGGGAGG GCAGCGGGGC CAGGCCAGTC
CTGGTCCAGC GCGCCACCTT CGAGGACCGG GTGCCGAGCC GCACCTTCGT GGGCACGATC
CGGCCGCGCA TCGAGAGCGA TCTCGGCTTC CGCGTGCAAG GGAAGATCGA GACGCGCCTC
GTGAATGTCG GCGACGTGGT GCGGGCGGGC CAGCCCCTGG CGCGGCTCGA CGAGGTCGAC
CTGCGCCTCC AGACCGAGCA GGCGCAGGCC GAACTCGCCG CCGCCACGGC GTCCCTGGCC
CAGGCCGAGG CGGATCTGCG GCGCACCGCC ACGCTGGCGG TCCAGGGCTG GAGCGCCGCC
GCCTCCCTCG ACCGCCAGAA GGCGGCGGCC GAGGAGGCGC GCGGCCGGCT GCTGCGGGCC
GAGCGCGCCC TGATGCTCGC CCGCAACGCC GTCTCCTACG CGGTGCTGGC GGCGGACGCG
GACGGGGTCG TGACCGCGGC CCTGGTCGAG CCCGGGCAGG TGGTGGCGCC GGGCCAGGCC
GCGATCCGCC TCGCCCGCAC GGCCGAGAAG GAGGCGGTGA TCGCTGTCCC CGAGGCCCTG
ATCGGGCAGG TGCGGGAGGG CGCCGCCACG GTCGGCCTGT GGTCCGACCC GAAGGCGAAG
CTCGCGGCGC GGCTGCGCGA ACTCGCGCCG GCGGCCGACG CGGCCACCCG CACCTACCTC
GCCCGCTTCT CGCTTCCCGA CGCCGATGCG CGGGTCCAGC TCGGCATGAC CGCCACCGTG
ACGCTGTCCG GCGCCTCGGC CGAGCGGATC GTCCGCGTCC CGCTCTCGGC CCTGTACAAT
CAGGGCGGCG GGCCGGCGGT CTGGACCGTG GACGAGGCCG GCGGGCTCAG CCTCAAGCCG
GTCAGCGTCG CCGCCTACGA GGCGCAGGAC GCGCTCGTGG CGGGCGGACT CGCGGAGGGT
GAGCGGTTCG TGCGCCTGGG CGTGCACAAG CTCGATGCCG GGCAGCGCGT GCGCGTCGTC
GACGCGCTGC GCTTCTGA
 
Protein sequence
MARPLVTPIR LAAALGWLAL AGCDEQKAPA AGEGSGARPV LVQRATFEDR VPSRTFVGTI 
RPRIESDLGF RVQGKIETRL VNVGDVVRAG QPLARLDEVD LRLQTEQAQA ELAAATASLA
QAEADLRRTA TLAVQGWSAA ASLDRQKAAA EEARGRLLRA ERALMLARNA VSYAVLAADA
DGVVTAALVE PGQVVAPGQA AIRLARTAEK EAVIAVPEAL IGQVREGAAT VGLWSDPKAK
LAARLRELAP AADAATRTYL ARFSLPDADA RVQLGMTATV TLSGASAERI VRVPLSALYN
QGGGPAVWTV DEAGGLSLKP VSVAAYEAQD ALVAGGLAEG ERFVRLGVHK LDAGQRVRVV
DALRF