| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2747 |
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| Symbol | |
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| ID | 6128957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 3053732 |
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| End bp | 3055585 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641642960 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001769619 |
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| Protein GI | 170740964 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.538174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.232228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTC CTCTTTCGTC CCGCCTGCGC GGCGGCGCCG CCCTCCTGGC GCTGTTCCTC
GCGGCCCCCT CGCCCGTCCT GGCCGCCCGC CTGACGCCCC GCGACGTCCC CGGACCGACC
ACCTACGAGC CGGCCGACTC CCTCGAGGGA AATTTCCTGG CGGCCTACAT CGCGGGCGCG
TCCCGGGATA CGACGGCGGC GGCCTCCTAC TATCGCGAGG CGGTGAAGGG CGACCCGCGC
AACGCCGAAT TGCTGGAGCG CTCCTTCGTG GCGCTGCTGG CGGACGGGTC CCTGCAGGAG
GCGTTCCGGG CGGCCGAGAA GCTTACCGCC CGCGACACGT CGAACGGCCT CGCCCAGCTC
GCCCTCGGGG TTCAGAAGCT GAAGGCCAAG CAATGGGGCG CGGCGCGCCA GAACCTGCAG
CGCGGCGGCC GGGGCGCCAC CGCGGACCTG ACCTCGACCC TGCTGACCGC GTGGTCCTAC
GCGGGCGAGG GCCAGGGGAA GAAGGCCTTC GAGACCATCA ACAAGCTCAA GGGCGAGCGC
TACATCGGGG TCTTCCGCGA CTACCACGCG GGCCTGATCG CCAGCGTGGT GGGCGACAAG
GTCGAGGCCG AGCGGCGCCT GAAATCCGCC TACGACGCGG ACCGCAACAC CCTGCGGATC
GTCGACGCCT ACGCGCGCTT CGAGGCCGAT TCCGGCCGGC CCGACCTCGC GGTCGCGGCC
TACGAGGCCT TCGACGCGGT GCTGCCGCGC CACCCGATCG TGCGCGACGC CCTCGAGAAG
CTGAAGGCCG GCAAACCCCT GCCGCCGCTG ATCGCGAGCG CCCAGGAGGG CGCCGCCGAG
GTGCTGTACG GGCTCGGCAC CGCCGGCACC TCGCAGGGCG AGGAGCTGCC GGCCGTCATC
TACCTGCGGC TCGCCCTCTA CCTCGCGCCC GAGCATCCCC TGGCGCTGCT CACCCTCGGC
GACACGCTCG AGCGCATGAA GATGCCCGAG CGCGCCAACG AGATCTTCGC CCGCATGCCG
GCGACCTCGC CGCTGAAGCT CAACACCGAC ATCCAGATCG GGCTCAACCT GGAGCAGCTC
GGCAAGAACG ACGACGCGCT GGCCCATCTC GACCAGGTCG CCAAGGCCAA CCCGAAGGAC
GTCGACGTGA TCTCGGCGCT GGGCAGCGTG CAGCGCCTGC GCAAGCAATA CGCGGAGGCC
GCCGAGACCT ACTCGAAGGC GATCGCCCTG ATCGGCTCGG AGCCGCCCCA GAATTACTGG
AACCTCTACT ACTACCGCGG CACCGCCTAC GAGCGGGCCA AGCAATGGCC GAAGGCCGAG
GCCGATCTCA AGAAGGCCCT GGAGCTGGTG CCGCAGAATC AGCCGAACGG GCGCGCGCAG
GTGCTGAACT ACCTCGCGTA TTCCTGGGTC GACCAGAACA TGAACATCGA CGAGGCCTTC
CGCATGCTGG AGAAGGCGGT CGACCTGCAG CCGCGCGACG GGATGATCGT CGACAGTCTG
GGCTGGGCGT ATTTCCGCCT CGGCCGCTGG GACGACGCCG TGCGCGAACT GGAGAAGGCC
GTCGACCTCA AGCCGGGCGA CCCGACCATC AACGACCATC TCGGCGACGC GTACTGGCGC
AGCGGCCGCC GGCTCGAGGC GAAGTTCCAG TGGCAGCACG CCAAGGACCT GAACCCGGAG
CCCGAGGATC TCGCCAAGAT CGAGCAGAAG CTGAAGGACG GCCTGCCCGA CGCGGACAAG
CCGGCCGCCA CCGCGGAGAG CCGGCCGACG CCGGACCAGC CGGCGATGCC GAAGGGCTCG
CCCGCCCCGA GCGATCCGCC CGCGATGGGC TCGACCCCGA AGGGCGGCGG CTAG
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| Protein sequence | MSRPLSSRLR GGAALLALFL AAPSPVLAAR LTPRDVPGPT TYEPADSLEG NFLAAYIAGA
SRDTTAAASY YREAVKGDPR NAELLERSFV ALLADGSLQE AFRAAEKLTA RDTSNGLAQL
ALGVQKLKAK QWGAARQNLQ RGGRGATADL TSTLLTAWSY AGEGQGKKAF ETINKLKGER
YIGVFRDYHA GLIASVVGDK VEAERRLKSA YDADRNTLRI VDAYARFEAD SGRPDLAVAA
YEAFDAVLPR HPIVRDALEK LKAGKPLPPL IASAQEGAAE VLYGLGTAGT SQGEELPAVI
YLRLALYLAP EHPLALLTLG DTLERMKMPE RANEIFARMP ATSPLKLNTD IQIGLNLEQL
GKNDDALAHL DQVAKANPKD VDVISALGSV QRLRKQYAEA AETYSKAIAL IGSEPPQNYW
NLYYYRGTAY ERAKQWPKAE ADLKKALELV PQNQPNGRAQ VLNYLAYSWV DQNMNIDEAF
RMLEKAVDLQ PRDGMIVDSL GWAYFRLGRW DDAVRELEKA VDLKPGDPTI NDHLGDAYWR
SGRRLEAKFQ WQHAKDLNPE PEDLAKIEQK LKDGLPDADK PAATAESRPT PDQPAMPKGS
PAPSDPPAMG STPKGGG
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