Gene M446_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2725 
Symbol 
ID6128967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3030723 
End bp3031526 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID641642939 
Producttwo-component response regulator 
Protein accessionYP_001769598 
Protein GI170740943 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver
[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.127392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAG CACAACTCGT CGTGCAGCAC CTGCCGTACC TGCGCCGCTA CGCACGCGCG 
CTCACGGGCA GCCAGGTGGC CGGCGATGCC TACGTGGCCG CGACGCTCGA AACGCTCGTC
AACGAGCCCG AAACACTGGG CCGCAGCGCG AACGTCAAGG CCGATCTGTT CAGGGTCTTC
ACGCGGATCT GGAACTCGTT GTCGGTGAAC GGTCAGAGCG ACCAAGTGCA GCACGACCTG
CCCGCCGAGG TCCGGCTCGG CCAGATCACG CCCCTGCCGC GGCAAGCCTT CCTGCTCTCC
TGCCTCGAAG GCTTCTCCGA GGAGGATGCC GCGACGATCC TGGGCGTCGA CATCTCGGAG
GTGCGCGACC TCGTCGACGA GGCGGGCCGG GAACTGGCCG CCGACATGGC GACCGAGATC
CTGATCATCG AGGACGAGCC GCTGATCGCC ATGGACCTGG AGGCCCTCGT CGAGGGGCTC
GGCCACAACG TCACGGGGGT CGCCCGCACG CGGTCGGAGG CGATCAAGCT CGCCGAGGGC
CGCAGGCCCG GCCTCATCCT GGCGGACATC CAGCTGGCGG ACGGCAGTTC CGGCCTCGAC
GCGGTCAACG ACCTGCTCAA GACCTTCGAG GTGCCGGTGA TCTTCATCAC GGCCTATCCG
GAGCGCTTCC TCACCGGCGA GCGGCCCGAG CCGGCCTTCC TGATCGCCAA GCCGTTCCAG
CCCGCCAACG TCTCCGCGGT GATCAGCCAA GCCCTCTTCT TCCAGCAGAG CGCCCGCCGC
CGCGAGGCCA AGGCAACGGC CTGA
 
Protein sequence
MSTAQLVVQH LPYLRRYARA LTGSQVAGDA YVAATLETLV NEPETLGRSA NVKADLFRVF 
TRIWNSLSVN GQSDQVQHDL PAEVRLGQIT PLPRQAFLLS CLEGFSEEDA ATILGVDISE
VRDLVDEAGR ELAADMATEI LIIEDEPLIA MDLEALVEGL GHNVTGVART RSEAIKLAEG
RRPGLILADI QLADGSSGLD AVNDLLKTFE VPVIFITAYP ERFLTGERPE PAFLIAKPFQ
PANVSAVISQ ALFFQQSARR REAKATA