Gene M446_2631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2631 
Symbol 
ID6133980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2922464 
End bp2923678 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID641642845 
Productisocitrate dehydrogenase 
Protein accessionYP_001769504 
Protein GI170740849 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.205618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA TCAAGGTGAC GAATCCCGTC GTGGAGCTCG ACGGGGACGA GATGACACGG 
ATCATCTGGC AGAACATCAA GGACAAGTTG ATCCATCCCT ATCTCGATAT CCCTCTGGAG
TACTACGATC TCGGGATCGA GCATCGCGAT GCCACGAACG ACCGGGTGAC CATCGAGGCG
GCCGAGGCGA TCAAGCGGCA CGGCGTCGGC GTGAAGTGCG CCACTATCAC GCCCGACGAG
GCGCGGGTGA AGGAGTTCAA CCTCAAGGAA ATGTGGAAGT CGCCGAACGG CACGATCCGC
AACATCCTGG GCGGCGTGAT CTTCCGCGAG CCGATCATCT GCCGGAACGT GCCGCGCCTC
GTGCCGGGCT GGACGCAGCC GATCGTCGTC GGCCGCCACG CCTACGGCGA CCAGTACCGC
GCCACCGACT TCAAGGTTCC GGGCAAGGGC CGGCTCACCA TCAAGTTCGA GGGCGAGGAC
GGCACCGTCA TCGAGCGCGA GGTCTTCAAG TTCCCGGGCG CCGGCGTCGC CCTGTCGATG
TACAACCTCG ACGACTCGAT CCGCGACTTC GCCCGCGCCT CGATGAATTA CGGGCTCGCC
CGCAAGTTCC CGGTCTACCT CTCGACCAAG AACACCATCC TGAAGGCCTA TGACGGCCGC
TTCAAGGATA TCTTCGAGGA GGTCTATCAG AACGAGTTCA AGGCGAAGTT CGACGCGGCC
GGCATCACCT ACGAGCACCG GCTGATCGAC GACATGGTGG CGTCGGCCCT GAAGTGGTCG
GGCGGCTACG TGTGGGCCTG CAAGAACTAC GACGGCGACG TGCAGTCGGA CACCGTGGCG
CAGGGCTTCG GCTCGCTCGG CCTGATGACC TCGGTGCTGC TGACGCCGGA CGGCCGGACC
GTCGAGGCCG AGGCCGCCCA CGGCACCGTG ACGCGCCACT ACCGCGAGCA CCAGAAGGGC
AAGGAGACCT CGACGAACTC GATCGCCTCG ATCTTCGCCT GGACCCGCGG CCTCTCCCAT
CGCGCCAAGC TCGACGACAA CGCGGAGCTG GCGAAGTTCG CCGCCACGCT CGAGACGGTC
TGCGTCGACA CCGTCGAGGC CGGCCACATG ACGAAGGATC TCGCGCTGCT CGTCGGCGCC
GATCAGCGCT GGCTCTCGAC GACCGGCTTC CTCGACAAGA TCGACGAGAA CCTCAAGGCC
GCGATGGCGG CCTGA
 
Protein sequence
MAKIKVTNPV VELDGDEMTR IIWQNIKDKL IHPYLDIPLE YYDLGIEHRD ATNDRVTIEA 
AEAIKRHGVG VKCATITPDE ARVKEFNLKE MWKSPNGTIR NILGGVIFRE PIICRNVPRL
VPGWTQPIVV GRHAYGDQYR ATDFKVPGKG RLTIKFEGED GTVIEREVFK FPGAGVALSM
YNLDDSIRDF ARASMNYGLA RKFPVYLSTK NTILKAYDGR FKDIFEEVYQ NEFKAKFDAA
GITYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLLTPDGRT
VEAEAAHGTV TRHYREHQKG KETSTNSIAS IFAWTRGLSH RAKLDDNAEL AKFAATLETV
CVDTVEAGHM TKDLALLVGA DQRWLSTTGF LDKIDENLKA AMAA