Gene M446_2619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2619 
Symbol 
ID6133879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2908057 
End bp2909694 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content74% 
IMG OID641642833 
Producturea ABC transporter, permease protein UrtB 
Protein accessionYP_001769492 
Protein GI170740837 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID[TIGR03409] urea ABC transporter, permease protein UrtB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.098179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCT GGCTCACCCT CGTCCTGACC CTCGTCGTCC TCGCCGCCGC CCTGCCGGCC 
GCGCACGCCC AGGCCCAGGC CCAGGCCCAG GCCCAAGCGC CGGCGCCGGC GCCGGCGCCG
GCGGAGGCCG CCTACGCCCG GCTCGCGAGC GACAGCTACG CCGAGATCGA GGCCGGCATC
GCCGCGCTCG CCGCGAGCGG CGACGCGCGG GCCGGCCTCG TCCTCGGCGC GCTCGCCGAC
GGAAGGCTCC TGTACCGCCC CGAGGACCGG GCCCTGGCGA TCCGGGACGG CGCCGCGCTG
ACGCTCGCCC GCACGGGCGC CGCGGTGCCG GGCGCGGAGG GGTTCAGGCC CGTGCGCGTC
AACAACCGGG TGCGCCGCGC CATCGACGCC GCGCAGGGCA CCCTCAACTT GGTCGCGCCC
GAGGCCGGCC GGCGCCGCGC CGCCGCGGAC GCGGTGTTCA AGGCGCGCGA CGTCTCCGCC
CTGCCGGCCC TCGACGCGGC GCTCGCCCGC GAGAGCGATG CGGGCGTGCG GCGCGCCCTG
GAGGAGGCCC GCGCCGCCGC CCTCCTCGCC AAGCCCGACG CGAGCGAGGC CCAGCGCGTC
GCCGCCGTGG CGGTGCTCCA GGCCCGCGGC GACGGCGACG CGCTCGCGAT CCTGCGCGGC
CTGCCGGCGG ACGCGCCGGC CGCCCTGCGC GAGGCCGGCG CCAAGGCGGT CGCCGGCATC
GCGTTCCGCC TCGCCATCCT GGCGAACCTC CAGAACGCCT GGTACGGCAT CTCCCTCGGC
TCGGTGCTGC TGCTCGCGGC GATCGGGCTC GCCATCACCT TCGGGGTCAT GGGCGTCATC
AACATGGCGC ATGGCGAGAT GGTGATGCTC GGCGCCTACA CGACCTTCCT GGTGCAGGAG
GTGATCCGCC AGCGGGCGCC CGGCCTGTTC GACTGGTCGC TGCCGATCGC CATCCCGCTC
GCCTTCCTGG TGGCGGGCGC GGTCGGCATC GTGATCGAGC GGGGCATCAT CCGCTTCCTG
TACGGCAGGC CGCTCGAGAC GCTGCTCGCC ACCTGGGGCG TCAGCCTGAT CCTGCAGCAG
GGGGTCCGCT CGCTGTTCGG GCCGACCAAC CGCGAGGTCG GGGCGCCGTC CTACATGTCC
GGCGCCGTCG ACGTGTTCGG CCTCGCGATC ACCTGGGGGC GGCTCTGGAT CGTGGTCTTC
GCGCTCGCCG TCTTCGTCGG GCTCAACCTG ATCCTCAAGG CGACCTCCTT CGGCCTGAAG
ACCCGGGCGG TGACGCAGAA CCGGCGCATG GCCGCCGCCA TGGGCATCCG CACGCCCTGG
ATCGACGCCT TCACCTTCGG GCTGGGCTCG GGCATCGCCG GCATCGCGGG CGTGGCGCTG
TCGCAGATCG ACAACGTCTC GCCCAACCTC GGCCAGAGCT ACATCATCGA TTCCTTCCTG
GTCGTGGTGT TCGGCGGCGT CGGCAATCTC TGGGGCACGC TCGTCGCGGC CCTGACCCTC
GGCGCCGCGA ACAAGTTCCT GGAGCCCTAC GCGGGGGCGG TGCTCGGCAA GATCCTGCTC
CTGATCTTCA TCGTGTTGTT CATCCAGAAG CGCCCGCGCG GCCTGTTCGC GCTGAAGGGC
CGGGCGGTGG AGGCGTGA
 
Protein sequence
MRRWLTLVLT LVVLAAALPA AHAQAQAQAQ AQAPAPAPAP AEAAYARLAS DSYAEIEAGI 
AALAASGDAR AGLVLGALAD GRLLYRPEDR ALAIRDGAAL TLARTGAAVP GAEGFRPVRV
NNRVRRAIDA AQGTLNLVAP EAGRRRAAAD AVFKARDVSA LPALDAALAR ESDAGVRRAL
EEARAAALLA KPDASEAQRV AAVAVLQARG DGDALAILRG LPADAPAALR EAGAKAVAGI
AFRLAILANL QNAWYGISLG SVLLLAAIGL AITFGVMGVI NMAHGEMVML GAYTTFLVQE
VIRQRAPGLF DWSLPIAIPL AFLVAGAVGI VIERGIIRFL YGRPLETLLA TWGVSLILQQ
GVRSLFGPTN REVGAPSYMS GAVDVFGLAI TWGRLWIVVF ALAVFVGLNL ILKATSFGLK
TRAVTQNRRM AAAMGIRTPW IDAFTFGLGS GIAGIAGVAL SQIDNVSPNL GQSYIIDSFL
VVVFGGVGNL WGTLVAALTL GAANKFLEPY AGAVLGKILL LIFIVLFIQK RPRGLFALKG
RAVEA