Gene M446_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2618 
Symbol 
ID6133878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2906906 
End bp2908054 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content70% 
IMG OID641642832 
Producturea ABC transporter, permease protein UrtC 
Protein accessionYP_001769491 
Protein GI170740836 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0436574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA TCGACCGGAA GGGCTGGGTC TTCCTCGCCG TCCTCCTCGC CTTCGCGGTG 
GCGGTGCCGG TCCTCAACCT CGCGACCGTC GAGGGCTCGG CGGCGAACGT GCCCACCTAC
GCGGTCTCGC TGATGGGCAA GTACCTCTGC TACGCGATCC TGGCGCTCAG CCTCGACCTC
GTCTGGGGCT ATTGCGGCAT CCTGTCCCTC GGCCACGGCG CCTTCTTCGC CCTCGGCGGC
TACGCGATGG GCATGTACCT GATGCGCCAG ATCGGCCCGC GCGGCGTCTA CGGCCACCCG
ATCCTGCCCG ACTTCATGGT CTTCCTGAAC TGGAAGGACC TGCCCTGGTA CTGGCACGGC
TTCGACTGGT TCCCCTTCGC GGCGCTGATG GTGCTGCTGG TGCCGGGCCT GCTCGCCTTC
GTGTTCGGCT GGCTCGCCTT CCGCTCGCGG GTGACCGGGG TCTACCTGTC GATCATCACC
CAGGCGATGA CCTTCGCGCT GATGCTCGCC TTCTTCCGCA ACGACATGGG CCTCGGCGGC
AATAACGGGC TCACCGACTT CAAGGACATC CTGGGCTTCA ACGTGCAGGC GCAGGGCACC
CGGGTGACGC TGTTCGTCCT CACCGCCGCC GCCCTGGCGC TCGCCTACCT GGTCGCCCGC
GTCATGACGA CCTCCGCCTA CGGCAAGGTG CTGATCGCGA TCCGCGACGC GGAATCGCGC
ACGCGCTTCC TCGGCTACCG CACGGCCCAC TTCAAGGTCC TGGCCTTCAC GGTCTCGGCC
ATGATGGCGG GCGTGGCCGG CGCCCTCTAC GTGCCGCAGG TCGGCATCAT CAACCCGTCC
GAGTTCACGC CGGCCAACTC CATCGAGGCG GTGATCTGGG TCGCGGTCGG CGGCCGCGGC
ACCCTGGTCG GGGCCGCCCT CGGCGGCGTC CTCGTCAACT ACGCCAAGAC GCTCCTCACC
GGCGCGATGC CGGACGCCTG GCTGTTCATG CTCGGCGCCC TCTTCGTCGT CGTCACCCTG
TTCCTGCCGC GCGGCATCGT GGGCACGCTC GTCGAGCGGC TCGGGAGCCG GCGCGCGCGG
GCGACCCTGC CCGGGCCGGC GCCGGGGGAG GTCGAGCCGG CCCTCGCCGA GGAAGGACGC
GGCTCATGA
 
Protein sequence
MTLIDRKGWV FLAVLLAFAV AVPVLNLATV EGSAANVPTY AVSLMGKYLC YAILALSLDL 
VWGYCGILSL GHGAFFALGG YAMGMYLMRQ IGPRGVYGHP ILPDFMVFLN WKDLPWYWHG
FDWFPFAALM VLLVPGLLAF VFGWLAFRSR VTGVYLSIIT QAMTFALMLA FFRNDMGLGG
NNGLTDFKDI LGFNVQAQGT RVTLFVLTAA ALALAYLVAR VMTTSAYGKV LIAIRDAESR
TRFLGYRTAH FKVLAFTVSA MMAGVAGALY VPQVGIINPS EFTPANSIEA VIWVAVGGRG
TLVGAALGGV LVNYAKTLLT GAMPDAWLFM LGALFVVVTL FLPRGIVGTL VERLGSRRAR
ATLPGPAPGE VEPALAEEGR GS