Gene M446_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2584 
Symbol 
ID6132173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2870373 
End bp2871104 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID641642798 
ProductMIP family channel protein 
Protein accessionYP_001769457 
Protein GI170740802 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.137548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.128052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGCA AATGCGTCGC CGAAGGCATC GGCACCTTCT GGCTGACATT CGCCGGGTGC 
GGCAGCGCGG TGATCTCCGC CGCCTTCCCG CAGGTCGGGA TCGGGCTCCT GGGCGTCGCC
CTCGCCTTCG GACTGACCGT GCTCACCATG GCCTACACGA TCGGGCCGAT CTCCGGCTGC
CACCTGAACC CGGCGGTCAC GATCGGGCTC ACGGTCGGCG GGCGGTTCCC CTCGAAGGAG
ATCGGCCCCT ACGTGGGCGC GCAGGTGGCG GGGGCGGTGG TCGCGGCCAT GCTGCTCTAC
GTGATCGCCA GCGGGGCGCC CGGCTTCGAC GCCGCCAAGG GCTTCGCCGC CAACGGCTAC
GGGGCGCACT CGCCCGGCGG CTACGGGGTC GGCTCCGCCT TCCTGGCCGA GGTCGTGCTC
ACCATGATGT TCCTGTTCAT CATCATGGGC GCCACGCACG GGAAGGCGCC GGCCGGCTTC
GCGCCGATCG CCATCGGGCT CGGCCTGACG CTGATCCACC TCGTCGGCAT TCCGATCACC
AACCTGTCGG TGAACCCCGC CCGCAGCACC GGACCGGCCC TGGTCGCCGG CAGCTGGGCG
GTGTTCCAGC TCTGGCTGTT CTGGGTCGCG CCGATCCTGG GCGGCGCGCT CGGGGGCAAG
CTCTTCCGCT GGCTGAGCGA GGAACCCGCG GCCGAGGTCA CGGGCGCCGC CCCGAAGCCC
GCCGTCCCGT GA
 
Protein sequence
MFRKCVAEGI GTFWLTFAGC GSAVISAAFP QVGIGLLGVA LAFGLTVLTM AYTIGPISGC 
HLNPAVTIGL TVGGRFPSKE IGPYVGAQVA GAVVAAMLLY VIASGAPGFD AAKGFAANGY
GAHSPGGYGV GSAFLAEVVL TMMFLFIIMG ATHGKAPAGF APIAIGLGLT LIHLVGIPIT
NLSVNPARST GPALVAGSWA VFQLWLFWVA PILGGALGGK LFRWLSEEPA AEVTGAAPKP
AVP