Gene M446_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2530 
Symbol 
ID6134686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2804309 
End bp2805517 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content70% 
IMG OID641642742 
Productputative ABC branched-chain amino transporter, periplasmic binding protein 
Protein accessionYP_001769407 
Protein GI170740752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT CCGCTGCCGG CCTGCGCCGG GCCGCCCTCG CGCTCTCCCT CCTCGCCGGC 
CCCGCCGCGG CGCAGGTCTC GGACGATGTG GTCCGCATCG GGGTGCTCAC CGACCTCTCG
GGACCCTACG CCGACAGCGG CGGGCGCGGC TCGGTGATCG CGGCCGAGAT GGCCGCCGCG
GATGCCGGCG GCTGGATCCT GGGTAAGCCG GTCGAGATCG TCTCGGCCGA CCACCAGAAC
AAGCCCGACG TGGCGTCGAG CATCGCCCGG CGCTGGTACG ACGTGGAGAA GGTCGACGCG
GTCGTCGACC TGCCAGTCAC GGCCATCGCG CTCGCCGTCC AGGCCGTGTC CAAGGAGAAG
AACCGCACCG TGATGATCAC GGCCGCGGCG ACCTCCGACC TCACCGCCAA GACCTGCTCG
CCCACGTCGT CACACTGGAC CGACGACACC CACGCGCTCA CGGCCGGCAC CGCGCGTGCG
GTGTTCGAGC GCGGCGGCCG ATCCTGGTAC TTCATCACCG TCGACCATGC CTTCGGGCAC
GCGCTCCAGA AGGAGGCCAC GGCCGTCGTC GAGTCGCTCG GCGGCAAGGT GGTCGGCACG
TCGCGCCACC CCATCGCCAC CGCCGACTAC TCCTCCTTCC TGCTCCAGGC CCAATCCTCG
GGCGCCGACG TGGTCGCCTT CGCCAGCGTC GGCGACGACT TCACTAAGGC GATCAAGCAG
GCGAACGAGT TCGGCCTGAC GCAGGGGGGG CAGACCCTCA CGGGCTTCCT CGTCTACATC
ACCGATATCA AGGGGCTCGG GCTGCCGGTC GCCCACGGCC TGACCTTTTC CTCGGCCTTC
TACTGGGACC AGAGCGAGCC CGCCCGCGCC TTCGCCAAGC GCTTCCAGGA CAAGACCGGC
GTGATGCCGA CCAAGAACCA GGCGCTGATC TACACCGCCG TGACGCATTA CCTGAAGGCG
GTCGCACAGG CCGGCACGGA CGAGGCGCTC GCGGTCAACA AGGCGATGCG GGCCATGCCG
GTCGCCTTCT TCGGCCATCC CGCGACCTTG AGGGCCGACG GGCGGCTTCT CTACGACCCC
GTCCTCTATC GGGTGAAGGG CGAGCGCGAG AGCAAGGGCC CCTGGGACCT CTACGAGGCG
GTGCGCTCCA TCCCGCAGGG CGAGGCCTTC CTGCCGATAA ACCCGGCTTG CGCCGGGCAG
AACGGGTGA
 
Protein sequence
MKRSAAGLRR AALALSLLAG PAAAQVSDDV VRIGVLTDLS GPYADSGGRG SVIAAEMAAA 
DAGGWILGKP VEIVSADHQN KPDVASSIAR RWYDVEKVDA VVDLPVTAIA LAVQAVSKEK
NRTVMITAAA TSDLTAKTCS PTSSHWTDDT HALTAGTARA VFERGGRSWY FITVDHAFGH
ALQKEATAVV ESLGGKVVGT SRHPIATADY SSFLLQAQSS GADVVAFASV GDDFTKAIKQ
ANEFGLTQGG QTLTGFLVYI TDIKGLGLPV AHGLTFSSAF YWDQSEPARA FAKRFQDKTG
VMPTKNQALI YTAVTHYLKA VAQAGTDEAL AVNKAMRAMP VAFFGHPATL RADGRLLYDP
VLYRVKGERE SKGPWDLYEA VRSIPQGEAF LPINPACAGQ NG