Gene M446_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2492 
Symbol 
ID6129010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2760239 
End bp2761189 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content66% 
IMG OID641642711 
Productprotein-export membrane protein SecF 
Protein accessionYP_001769378 
Protein GI170740723 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.27994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.326076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCC TCCGCCTCTG GCCCGACGAA TCCCACTTCG ACTTCATGCG CCTGCGGCGC 
TTCAGCTTCC CGCTCTCGGC GCTGATGTCG GTGGGGACGC TGGTGCTGTT CCTGATCATC
GGGCTCAATT TCGGCATCGA CTTCAAGGGC GGCACCCTGA TCGAGCTGCG CCCGAAGGCC
GGCCAATCGG ACGTGGCCTC GGTGCGCCAC ACCGCCAACG GCTTCGGCTT CGGCGAGACC
GAGGTGCAGG AATTCGGCAA TCAGGGCGCG ATCTCGATCC GCTTCCCGCT CCAGGCCGGC
GGCGAGACCG GGCAGACCCT GGTGATGCAG AAGGCCCACG AGGCCTTCGA CAGGGACTAC
GCCTTCGACC GCGTCGAGAC CGTCGGGCCC CGCGTGTCGG GCGAGCTCGT GCAGTCGGGC
ACGATCGGCG TCGTCCTGTC GGTCGTGGCG GTGCTGCTCT ACCTCTGGTT CCGGTTCGAG
CGGGAACTGG CGCTGGGCGC CATTGTCGGC ACGCTCCACG ACATCGTGCT CACCGTCGGC
GTCTTCGTGA TCTCCCGGAT CGAGTTCAAC ATGACCTCGA TCGCCGCCAT CCTCACCATC
GTGGGCTACT CGCTGAACGA GACCGTAGTG GTGTTCGATC GCACCCGCGA GCTGATGCGG
CGCTACAAGA CCATGCCGAC CGAGGAACTG CTCAACCGCT CGATCAACTC GACCATGTCG
CGCACGGTGA TGACCGCGAC CTCGACCGCC CTGTCGCTGG TCGCCCTGGT GCTGTTCGGC
GGCGAGGCGA TCAAGGGATT CTCGGTCGTG ATGTTGATCG GCGTGGTGAT CTGCACCTAC
TCGGCGATCT TCATCTCGTC GCCGTTCCTG ATCTATATCG GCCTGCAGGC CGGCGGCGGG
ATCCGGGCGA CCGGGCGCGA CCCCGCGGCC CTGCCGCAGG CGGCCGAATG A
 
Protein sequence
MRLLRLWPDE SHFDFMRLRR FSFPLSALMS VGTLVLFLII GLNFGIDFKG GTLIELRPKA 
GQSDVASVRH TANGFGFGET EVQEFGNQGA ISIRFPLQAG GETGQTLVMQ KAHEAFDRDY
AFDRVETVGP RVSGELVQSG TIGVVLSVVA VLLYLWFRFE RELALGAIVG TLHDIVLTVG
VFVISRIEFN MTSIAAILTI VGYSLNETVV VFDRTRELMR RYKTMPTEEL LNRSINSTMS
RTVMTATSTA LSLVALVLFG GEAIKGFSVV MLIGVVICTY SAIFISSPFL IYIGLQAGGG
IRATGRDPAA LPQAAE