Gene M446_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2464 
Symbol 
ID6129972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2728581 
End bp2729834 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content50% 
IMG OID641642683 
Productmajor facilitator transporter 
Protein accessionYP_001769350 
Protein GI170740695 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.532974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0764442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGG GTAATGACCG CCGCAACTAC TTGCTATTCC TAGTTACCTG CTCCGGTTTG 
GTGGCGACTG CGCGGGCAAT GACGCTGTCA TTCCTCGTCA TAAAGCTTCA CGAGTCCTTC
GGACTTGGGT CAGCTATAAT AGGCGCCTTG TTGGGTGCTG GTCCATTAGT CGGGGCCGTA
GTAGCTCCAT TCGCCGGATC GCTATCCGAT CGTATGGAGC GAAAGCCCGT TCTGACGTTG
ACGCTATTCA TGACAGCAGT GGCGCTTTTG GGGATGGCCG TTGCTGAATC CGTCTTGACG
TTTTGTCTAG CGCAGATTGT GTCGGCCGTC GCCCTAGCTG TTTATGAACC TGTGTCGCGC
GCGTTAATGA GCGACGTTTG CCCTGAAGAG CAGCGATTGC GCTTCTTCTC GTGGCGGTAC
ACCACTAATA ACGTTGGATG GGCTATTGGA CCTCTGATTG GAGTCAGCGC CGGCGCTACA
GCATCAATCC TGTTTTTCTC AGCAAGTTTT TTATACGCAT TTTTCGCAAT CGCTCTGCTA
TTGGTAACAG TTCCGTATAA TCAGAGACAT AATGTTTCGA CAGAGGTTCA GCATACATCC
GTTTTTTCAT GTGTGAGGGC TGCCATACGC GATCCTCGAT TAGCTTTCTT CGTTTTAGGG
GGGACGCTTT TGATTGCGGT TCACGGTCAA TACTCTGCGA CCCTGGCGCC GTACTTGTCT
ACAAGTATCG AGAATGGTAA TTCCATTTTT GCTTACCTCG TTTCGATCAA CGGCTTCGTG
GTTCTCCTCG GCAATCCCAT AGCAAGAAGA TTCATCGAGA GCGTTGGGGC ACGTCATGCA
CTTGTGATGG GGTGCGGTTT GTTTTTTATA GGAGAGATCT CTTTTATGTT CTCCAACAAT
CTCTTAACAT TCTCGGTTGC GATGACGATT TTTACGCTTG GGGAAATATT AGTCGTTCCG
TCTGAATATA TGATGGTTGA TGACATCTCT AACGATCTCA ATCGTGGTGG TTATTTTGGA
GCACATTCAT TTTCGACGAT TGGGAATTTT ATCGGTCCAA CCTTAGGGGG AGTCTTGTTA
GGCGCATACG GTGGAGCTGC AATGTTTTTA CTTTTTTCCG CTTTCGCCGT GGCCAGCGCA
TTTTTCTTCG TTGTAGGGGC ACGCATGCCG CCGCCGACCG CGTCAAAACG GGACGCGAAA
CCTCCCAGAA TCGATAGCCC AATCTCTTCT ATTGTCAGGA CACGCTCTGC CTGA
 
Protein sequence
MKMGNDRRNY LLFLVTCSGL VATARAMTLS FLVIKLHESF GLGSAIIGAL LGAGPLVGAV 
VAPFAGSLSD RMERKPVLTL TLFMTAVALL GMAVAESVLT FCLAQIVSAV ALAVYEPVSR
ALMSDVCPEE QRLRFFSWRY TTNNVGWAIG PLIGVSAGAT ASILFFSASF LYAFFAIALL
LVTVPYNQRH NVSTEVQHTS VFSCVRAAIR DPRLAFFVLG GTLLIAVHGQ YSATLAPYLS
TSIENGNSIF AYLVSINGFV VLLGNPIARR FIESVGARHA LVMGCGLFFI GEISFMFSNN
LLTFSVAMTI FTLGEILVVP SEYMMVDDIS NDLNRGGYFG AHSFSTIGNF IGPTLGGVLL
GAYGGAAMFL LFSAFAVASA FFFVVGARMP PPTASKRDAK PPRIDSPISS IVRTRSA