| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2453 |
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| Symbol | |
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| ID | 6129935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 2714216 |
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| End bp | 2717749 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641642673 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001769340 |
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| Protein GI | 170740685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0637205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGA GATTCTTAGC CGGCTTAAGC TTTGCAGTGA GCGTCATCAG AAGGGCGTAT
TTTCGTCATT TTTATAAGCA GAAATGTAAA AATCTCATAT ATATACTAAC AATAATTATC
CTTATAGGAA ATTCCGCTGT TGTGGTGCGT GCACAAGACG CACCTCTCGG GCAATGGTGC
GACGGGGCAT CGGGTACCTG CGCAGGGTCG CCAGAGGCGG CGTGCGCAGC TCAGTGGAGA
TGGTCCGGAA TGGACAATGG CTTCAGCAGA TTACTGGTGC CATCCATGAC AGACGACAAT
CCATACTTTG CAGGGTGTCG GTGGACAAGC TTCCAATACC TCTGCCCTCA AGAGACAGGA
GGCGGGATCA ACTCGTGCTG GGTGAGGCTC CCGGCCTGGG TCAGCTTCAG CTGTCCGGAC
GGCTACACGC CTTACGGGAA CAGTCGGTGC GTTCCTATAC CGATTCGCGA ACCCGTGGAG
TGTGTTGCCA ACAACACAGG AAACGTCAAT CCAGTTGTTG GTAATCCAGT CATGGTGTCG
TCAGGCTCAA AATTAGAGAA GAAGACAGAT TTCTCGACAT CGGATGGGAG ATTCTATATT
GGGCGCTCAT ACCGTAGCTT TCCACAAATC ACAAATGTGT CGTCGTGGAG AGGCCCGGTC
CGCGGCGACG TAAATGGCTG GCGCTTCGAT TTTATGATGG AGCTCCACAT CGGCGAAAAT
GGAAGAGTGA CAATCCATGC TCCTGACGGC ACCGCCCATG ATTTCGCGCT GTCGAACGGA
TCATTCGCTG CCGCCAAGGG AGTGGTCCAA ACCGGATACA GCCTGTCCTT CGTCGGATCT
CCTCCTTCGA ACTGGAACGA TGTGACCGCC GCCTCGCAGC AATGGCGTGT CACAGATCCG
TCCAGGAGAG TATGGATCCT CAAAACGTTC AACCGCGACA TTAATGAAAA GAACAATTAT
ATCATTGGTA GGCCTATAAG TTTATTATCG CCTGACGGAT ATCAGTTGAA TTTTTCTTAT
GGCCCGTCTG ATGAGCTCGC GGCGATCAGC GACAACCTCG GCAGGGCATT CTCTATTTCC
TGGAGATTTT ATAATATAAC GGCAGTCAAA GATTTTGAGG GATCACGCCC GGTGCCGGAG
GCTATCAGCC AGATCGGCCT TCCAGGCGGC GGTCAGCTTC GCTATACTTA TGACCCTGCT
CCGGCAAACC CATCCGTTGG ACGCGTCCAA CGCCTGACGA AGGTCGAGAA GATCGACGCG
GCTGGTCACG TCACCGGGTC GTTTTCCTAT CACTATGAAA ACACAAGATT TCCCAATCTC
TTGACGGGCA TCTCCGACGA GAGGGGCGTG CGATTCGCGA CATTCGCGTA CGACGCATCC
GGTCGGACCA CCGCGTCGAT GCATGCGGGA TCGAATCAGA CGTACAGCTT GAGCTTCGGA
GGCACGGCCT CCTCTCCGAC CACGACGGTC ATCAATCCTC TCGGAAAAGC CGAGGTATAC
AATTTCACGC GCACGGGCGA GGGCGACGTA CGTCTGGTGT CCATCGATGG TCAGCCGAGC
GCGAATTGCG TCGCGAGCAC CCGTCGCATC ACGTATGATA CGAACAAGTT CATCGCAACC
GAGACCGATG AGGAAGGGCG GGTCACGGCG TACGTGCGCG ACGCGCTCGG CCGGCCCACC
TCGATCACGC GCGGATCCGG AACCCCGCAG GTCTCCACGA CGACGATTCT GTGGCACCCC
ACCTTCAACC TGCCCGTGCG AACCGTCGAG CCAGGTCTCA CGACCGACTT TGCCTACGGC
GCCACGGGGC AACTGACCCA AGTCACCCAG ACGGACACGA CGTCTCAAAC GGTCCCGTTC
TCCACCAATG GACGCGTGCG GGCCTGGACC TATGGCTATG CGACGACCGG GCTGCTCACC
TCCGTCGACG GACCCTTGCC CGGACCCGGC GATACGGTTT CCTACACCTA CAACTCCAAC
GGCTTTCTCC AAACAGCGAC CAATGAACTG GGACAGGTCA GCACCGTGAC TGCCTGGAAT
GGCCGCGGAC AGCCTACCTC CGTCACCGGT CCGGACAGCG TCGTCACCGC CTTTGCTTAC
GACGATGCCG GCCGCCTTAC CGGCATGACG ATCAATCCGG GCCCGTCGCA GACCGCCTGG
AGCTTCAGCT ACACTCCGGC GGGAGATCTC GCCACTTACA CCGAGCCTGC CGGTGCCAGC
TACACCCTGA CCTGGGATGA GGCCCGCCGC CTGATCAAGG TCACCAACAC CCTCGGCGAG
AGCGTCACCT ACGCCCGCGA CGCCATGGGC AATGCCACCG CCAAGACCAT CACGGCGGCC
GACGGCTCAA CCCAGATGTT CCGCCTCGCC AACACCTTCG ACGAGCTCGG GCGCCTCATC
AAGCAGGTCG GCGGCCAGGG CCGCACCTGG AGCTTCGCCT ACGACAGGAC CGGCAACCTC
ACCACCGTCA CCGACCCGCG CGGCAAGGCT CTCGGCTTCG GCTTCGACGC GCTCAGCCGC
CTCGTCACCG AGACCGAGCG CGACGGGGGC GTGGTCCAGC ACGCCTACAA CGCCAAGGAC
GAGGAGACCA CCTACACCGA CCCCCGCAAT CTCGCGACCA CCTATGTGCG CAACGGCTTC
GGCGAGGTCA TCCAGGAGAC CTCGCCCGAC CGCGGCACCA CCGTCTACGA CTACGACGCC
CGCGGGCTGA TGATCCGCAA GACGGACGCG CGCGGGGTCA CCACCACCTA CAGCTCCGAC
GCGGCCGGCC GGCTCACCTC CCGCTCCTAC CCGACCGCGG CCCTCAACGA GAGCTTCGGC
TACGACGACA CCGCGGGCGG GCCGACCGGC CGGGGGCGGC TCACGCGGAT GCAGGATGCG
GCCGGCAGCT CGGACTTCTA CTACGACGCG GTCGGGCGGG TGACCGGCGA GGTGCGCACC
ATCGGCGGCC ACGCGCACAC GGTGGCCTAC ACCTACGACG CGGCCGGCAG CGGCAGGCTC
TTGTTCCTGA CCTACCCGTC GGGGCGGGTG GTCACCTACG GCTACGACGC GCTCGGCCGG
GTGAACTCCG TCGGGCTGAA GATGTCCGCG ACCGCGCCCG AGCAGGTGAT CGCCTCCTGG
GCGGGGTACT TCCCGTTCGG CGGCCTGCGC GGCCTCACCT TCGGCAACGG GCTGAACATG
TGGTCGAACA ACGACCTGGA GTACCGGCTG GACGGGCTGT TCCTCGACCA GGCCTCGGGC
GGCCCGAGCC TGATCACGCG CTACCACTGG GTCGGCGACG GGCTCAACCT GATGGCGCTG
AACAACGACA CGATCGACCC GGGCCAGACG CAGCGCTTCA CCTACGACGA CGCGGCCCGG
CTGCTGACGG CGACGGGCCC CTACGGCAGC CTGAGCTGGA GCTACGACAA GGTCGGCAAC
CGGCTGAGCG AGACGCGCAC GGTGGCGGGC ACGACCAGTA CGCAGTGTGA GCGGGCGTTG
GATCCTCCTC ACTTGTGGGC CTGCAATTTT CCCCACCCTC CCGGCCGCCC CTGA
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| Protein sequence | MSMRFLAGLS FAVSVIRRAY FRHFYKQKCK NLIYILTIII LIGNSAVVVR AQDAPLGQWC
DGASGTCAGS PEAACAAQWR WSGMDNGFSR LLVPSMTDDN PYFAGCRWTS FQYLCPQETG
GGINSCWVRL PAWVSFSCPD GYTPYGNSRC VPIPIREPVE CVANNTGNVN PVVGNPVMVS
SGSKLEKKTD FSTSDGRFYI GRSYRSFPQI TNVSSWRGPV RGDVNGWRFD FMMELHIGEN
GRVTIHAPDG TAHDFALSNG SFAAAKGVVQ TGYSLSFVGS PPSNWNDVTA ASQQWRVTDP
SRRVWILKTF NRDINEKNNY IIGRPISLLS PDGYQLNFSY GPSDELAAIS DNLGRAFSIS
WRFYNITAVK DFEGSRPVPE AISQIGLPGG GQLRYTYDPA PANPSVGRVQ RLTKVEKIDA
AGHVTGSFSY HYENTRFPNL LTGISDERGV RFATFAYDAS GRTTASMHAG SNQTYSLSFG
GTASSPTTTV INPLGKAEVY NFTRTGEGDV RLVSIDGQPS ANCVASTRRI TYDTNKFIAT
ETDEEGRVTA YVRDALGRPT SITRGSGTPQ VSTTTILWHP TFNLPVRTVE PGLTTDFAYG
ATGQLTQVTQ TDTTSQTVPF STNGRVRAWT YGYATTGLLT SVDGPLPGPG DTVSYTYNSN
GFLQTATNEL GQVSTVTAWN GRGQPTSVTG PDSVVTAFAY DDAGRLTGMT INPGPSQTAW
SFSYTPAGDL ATYTEPAGAS YTLTWDEARR LIKVTNTLGE SVTYARDAMG NATAKTITAA
DGSTQMFRLA NTFDELGRLI KQVGGQGRTW SFAYDRTGNL TTVTDPRGKA LGFGFDALSR
LVTETERDGG VVQHAYNAKD EETTYTDPRN LATTYVRNGF GEVIQETSPD RGTTVYDYDA
RGLMIRKTDA RGVTTTYSSD AAGRLTSRSY PTAALNESFG YDDTAGGPTG RGRLTRMQDA
AGSSDFYYDA VGRVTGEVRT IGGHAHTVAY TYDAAGSGRL LFLTYPSGRV VTYGYDALGR
VNSVGLKMSA TAPEQVIASW AGYFPFGGLR GLTFGNGLNM WSNNDLEYRL DGLFLDQASG
GPSLITRYHW VGDGLNLMAL NNDTIDPGQT QRFTYDDAAR LLTATGPYGS LSWSYDKVGN
RLSETRTVAG TTSTQCERAL DPPHLWACNF PHPPGRP
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