Gene M446_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2399 
Symbol 
ID6129396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2666955 
End bp2667941 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content75% 
IMG OID641642623 
Productanaerobic benzoate catabolism transcriptional regulator 
Protein accessionYP_001769291 
Protein GI170740636 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.125376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCAG GTTCCCCACC CTCCCTCGCG CGCGCCGCCG CGGATCCGTC GTCAGGGAGC 
GGCGCGGCCG GGGGCCGGCC GGCCGGCGCC GATTCGCCGG CGGCCGAGGC CGAGAGCCGC
TTCCTGGCCG AACTCGGCCA GCGGGTGCGC ACGGCGCGCG CCGTGCGCGC GATGTCCCGC
AAGGCGCTCT CGCACAGTTC CGGCCTGTCC GAGCGCTACA TCGCGCAGCT CGAGACCGGG
CACGGCAACG TCTCGATCAT CCTGCTGCGG CGCGTCGCCC ACGCGATCGG CGTGCCGCTG
GAGGACCTGA TCGCCCCCGT CGACGCGTCG CCGGACTGGC CCGTGGTGCG CGACCTGCTG
GAGACCGCCT CCGGCGCCCA GATCGCGGAG GCCAAGCGCA TCCTCTCGGG GGTCGGCGGC
ACCCAGGCCG GGGAGGTGGA GCCCCAGCGC GTGGCCCTCA TCGGCCTGCG CGGCGCGGGC
AAGTCGACCC TCGGGCGCAT CCTGGCCGAG CGGCTCGGCT GGCGCTTCGT CGAGCTCAAC
CGGGAGATCG AGCGGGAGAA CGGCCTGTCG GTGGCGGAGA TTTTCGCGAT CTACGGCCAG
GAGGGCTATC GGCGCCTCGA ACAGGCGGCC CTGCGCAAGT TCGCGGTGGA CGAGGGACCG
GTCGTGCTGG CGACCGGCGG GGCGATCGTG GCCGAGCCGC TCACCCTCGA CCTGCTGCTC
TCGGCCTTCT TCACGGTCTG GCTCAAGGCC CAGCCGGAGG ACCACCTGCG CCGGGTGCGG
GAGCAGACCG CCCTCGGGGC CGCGCGGCCG CGGCTGCCCG ACAACGACAG CGCGCTGCGC
GAGCTGAAGG CGGTGCTGCT CAGCCGCGAG CCCCTCTACG CGAGGGCCCG TGCGGTGATC
GACACCACCG ACCTCACGGT CGCCGAGACC GCCGCCCGGC TCACCGGCCT CGTGGAGAAC
CATTTCGGCC TGCGCCAGCG CCGCTGA
 
Protein sequence
MPSGSPPSLA RAAADPSSGS GAAGGRPAGA DSPAAEAESR FLAELGQRVR TARAVRAMSR 
KALSHSSGLS ERYIAQLETG HGNVSIILLR RVAHAIGVPL EDLIAPVDAS PDWPVVRDLL
ETASGAQIAE AKRILSGVGG TQAGEVEPQR VALIGLRGAG KSTLGRILAE RLGWRFVELN
REIERENGLS VAEIFAIYGQ EGYRRLEQAA LRKFAVDEGP VVLATGGAIV AEPLTLDLLL
SAFFTVWLKA QPEDHLRRVR EQTALGAARP RLPDNDSALR ELKAVLLSRE PLYARARAVI
DTTDLTVAET AARLTGLVEN HFGLRQRR