Gene M446_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2388 
Symbol 
ID6129806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2656749 
End bp2657225 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content72% 
IMG OID641642612 
Producthypothetical protein 
Protein accessionYP_001769280 
Protein GI170740625 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4964] Flp pilus assembly protein, secretin CpaC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00562819 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0111097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGC GCCCCATCCG CCTCCTGCGC GCCCCCCTCA GCGCCGCCCT CGTCCTCGCC 
GCGCTGCTCC CGGCCGCGGC GGCCGGCGGG GCGGGGGACC AGGCCACGGT GGTCGTCTCC
GTCGACAACG CCAAGATCAT CCGGCTGCCG GAGCGCACCG CGACCGTGGT GGTCGGCAAC
CCGATCATCG CGGACGTCTC GCTGCAGCGG AACGGGCTCG TCATCCTCAC CGGCAAGAGC
TTCGGCACCA CGAACCTGAT CGCGCTCGAC GGCTCCGGCG CGATGCTGGC CGAATCCTTC
ATCAGCGTGC AGGCCGCCAC CACCTCGGTG GTGACGGTGC AGCGCGGCCT GGAGCGGGAA
TCCTACTCCT GCACCCCGGC CTGCCAGCCG GCCGTCCAGC TCGGCGACGC GCAGCGATAC
TTCTCCGAGG TCAGCAGCCA GGCCGGCCAG CGCAACACCC TGGCGACCGC GAAATGA
 
Protein sequence
MPVRPIRLLR APLSAALVLA ALLPAAAAGG AGDQATVVVS VDNAKIIRLP ERTATVVVGN 
PIIADVSLQR NGLVILTGKS FGTTNLIALD GSGAMLAESF ISVQAATTSV VTVQRGLERE
SYSCTPACQP AVQLGDAQRY FSEVSSQAGQ RNTLATAK