Gene M446_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2380 
Symbol 
ID6130147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2648363 
End bp2649331 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID641642604 
Producttype II secretion system protein 
Protein accessionYP_001769272 
Protein GI170740617 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.316858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.875213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGCT TCGACGCCCT GATCGTGGCC GGCCTCCTGG CGGTGACGGC CTCCTGCCTC 
GCCTACGCGG TCGTCGTCCC GCTTTTGCCC TCCGAGGCGC GGGCCGCCAA GCGCCAGCAG
GCCATCGCGG GGCGCCGCTC GCCCATGGAG CGCGTCCAGG CGGTCAACCG CCGCGAGCAG
GTCGCCAAGA GCCTCAAGGA GCTCGAGGCG AAGGAGAGGA AGGCCCGGCC GAGCCTGGAG
CTTCGGATCA CGCAGGCCGG CCTCAGCATC ACCAAGAGCC AGTTCTACGT CGCGAGCGGC
GTCCTGGCGG GTGTCTCCCT CGTGATGGGC TTGGTGATGA GCGGCAGCCC GCTGACGGCG
ATCGCCCTCG CCTTCGCGGC CGGGCTCGGG CTGCCGCAAT GGCTCCTCGG CTACCTGCGC
AAGCGGCGGA TCGCGCGGTT CGTCCTCGAA TTGCCGAACG CGATGGACGT GATCGTGCGC
GGCATCAAGT CGGGCCTGCC GGTGGGCGAT TGCCTGCGCA TCATCGCCCG CGAGGCGCCC
GAGCCGGTGC GCACCGAGTT CCGCGCCCTC GTCGAGTCGC AGGCCGTGGG CGTGTCCCTG
AGCGAGGCCG CCACGAAGCT CTTCGAGCGC ATGCCGGTCT CGGAGGCGAA TTTCTTCGCC
ATCGTGATCG GCATCCAGGC GAAGTCGGGC GGCAATCTCT CGGAGGCGCT CGGCAACCTG
TCGCGCGTGC TGCGCGACCG GCGGCGCATG GCCGACAAGG TGAGCGCGAT GAGCATGGAG
GCCCGGGCCT CGGCGGCGAT CATCGCCTCC CTGCCCTTCG TGGTCGCGGT CCTGTGCTAC
TTCTCGAGCC CCGACTACAT CTCGCTCCTC TGGACGACGC AGGTCGGCCA GATCGCGATC
ACCCTCTCGG GCCTCTGGAT GGTGGTCGGG GTGCTGGTGA TGAAGCGCAT GATCACTTTC
GAGATCTGA
 
Protein sequence
MTSFDALIVA GLLAVTASCL AYAVVVPLLP SEARAAKRQQ AIAGRRSPME RVQAVNRREQ 
VAKSLKELEA KERKARPSLE LRITQAGLSI TKSQFYVASG VLAGVSLVMG LVMSGSPLTA
IALAFAAGLG LPQWLLGYLR KRRIARFVLE LPNAMDVIVR GIKSGLPVGD CLRIIAREAP
EPVRTEFRAL VESQAVGVSL SEAATKLFER MPVSEANFFA IVIGIQAKSG GNLSEALGNL
SRVLRDRRRM ADKVSAMSME ARASAAIIAS LPFVVAVLCY FSSPDYISLL WTTQVGQIAI
TLSGLWMVVG VLVMKRMITF EI