Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2380 |
Symbol | |
ID | 6130147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 2648363 |
End bp | 2649331 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641642604 |
Product | type II secretion system protein |
Protein accession | YP_001769272 |
Protein GI | 170740617 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.316858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.875213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGAGCT TCGACGCCCT GATCGTGGCC GGCCTCCTGG CGGTGACGGC CTCCTGCCTC GCCTACGCGG TCGTCGTCCC GCTTTTGCCC TCCGAGGCGC GGGCCGCCAA GCGCCAGCAG GCCATCGCGG GGCGCCGCTC GCCCATGGAG CGCGTCCAGG CGGTCAACCG CCGCGAGCAG GTCGCCAAGA GCCTCAAGGA GCTCGAGGCG AAGGAGAGGA AGGCCCGGCC GAGCCTGGAG CTTCGGATCA CGCAGGCCGG CCTCAGCATC ACCAAGAGCC AGTTCTACGT CGCGAGCGGC GTCCTGGCGG GTGTCTCCCT CGTGATGGGC TTGGTGATGA GCGGCAGCCC GCTGACGGCG ATCGCCCTCG CCTTCGCGGC CGGGCTCGGG CTGCCGCAAT GGCTCCTCGG CTACCTGCGC AAGCGGCGGA TCGCGCGGTT CGTCCTCGAA TTGCCGAACG CGATGGACGT GATCGTGCGC GGCATCAAGT CGGGCCTGCC GGTGGGCGAT TGCCTGCGCA TCATCGCCCG CGAGGCGCCC GAGCCGGTGC GCACCGAGTT CCGCGCCCTC GTCGAGTCGC AGGCCGTGGG CGTGTCCCTG AGCGAGGCCG CCACGAAGCT CTTCGAGCGC ATGCCGGTCT CGGAGGCGAA TTTCTTCGCC ATCGTGATCG GCATCCAGGC GAAGTCGGGC GGCAATCTCT CGGAGGCGCT CGGCAACCTG TCGCGCGTGC TGCGCGACCG GCGGCGCATG GCCGACAAGG TGAGCGCGAT GAGCATGGAG GCCCGGGCCT CGGCGGCGAT CATCGCCTCC CTGCCCTTCG TGGTCGCGGT CCTGTGCTAC TTCTCGAGCC CCGACTACAT CTCGCTCCTC TGGACGACGC AGGTCGGCCA GATCGCGATC ACCCTCTCGG GCCTCTGGAT GGTGGTCGGG GTGCTGGTGA TGAAGCGCAT GATCACTTTC GAGATCTGA
|
Protein sequence | MTSFDALIVA GLLAVTASCL AYAVVVPLLP SEARAAKRQQ AIAGRRSPME RVQAVNRREQ VAKSLKELEA KERKARPSLE LRITQAGLSI TKSQFYVASG VLAGVSLVMG LVMSGSPLTA IALAFAAGLG LPQWLLGYLR KRRIARFVLE LPNAMDVIVR GIKSGLPVGD CLRIIAREAP EPVRTEFRAL VESQAVGVSL SEAATKLFER MPVSEANFFA IVIGIQAKSG GNLSEALGNL SRVLRDRRRM ADKVSAMSME ARASAAIIAS LPFVVAVLCY FSSPDYISLL WTTQVGQIAI TLSGLWMVVG VLVMKRMITF EI
|
| |