Gene M446_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2310 
Symbol 
ID6135658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2571329 
End bp2571991 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID641642536 
ProductTetR family transcriptional regulator 
Protein accessionYP_001769204 
Protein GI170740549 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.987325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00710043 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGCGCA TCGCCGGCTC GTCGGGGCCG AGGACCGAGG AGGCGATCCG CAGGGCGGGC 
CTCCAGCTCC TCTACACGCA CGGCTACGCG GCCATGAGCC TGCGCCAGCT CGCGGGCGTG
GTCGGCATCC AGCAGGGCTC GCTCTACAAC TATTTCCGGA ACAAGCAGGA ATTCCTGTTC
GACCTGATCC GCCGCCACAT GCGCGACCTG CACGCGGCGC TCGACGCGGC GCTGCTGCCG
GAGGGCAGCG CGGTGGCGCG GCTGACGCGC TTCGTCGAGT TCCACGTCGC CTACCACGTC
GAGCGGCCGC AGGAGGTCTT CATCTGCTAC TCCGAGCTGC GCAGCCTCGA GCCGGAGAAC
TACGCCGCGA TCGTCGCGAT GCGGCGCGAC TACGAGGCCA AGCTGGTCGA GATCCTGGAA
TTCGGCCGGG AGACCGGCGA GTTCCGCTTC GCCGACACGA AGATGACCGC CTACGCGATC
CTCGCCCTGC TGTCGGGCAT CTGCACGTGG TTCCGGCCGG GCGGGCGCCT GAGCAAGGAC
GACGTGCGGG AGACCTTCCT CGGCATGGTC CTGTCGCTGG TGAGCGGGGC GGGGATGCGC
GAGAGCTTCG CCGAGCCGCC CCGGCTCGCC GCGATCAGCC GGTCGGGCGC TCGTCGGCGA
TGA
 
Protein sequence
MARIAGSSGP RTEEAIRRAG LQLLYTHGYA AMSLRQLAGV VGIQQGSLYN YFRNKQEFLF 
DLIRRHMRDL HAALDAALLP EGSAVARLTR FVEFHVAYHV ERPQEVFICY SELRSLEPEN
YAAIVAMRRD YEAKLVEILE FGRETGEFRF ADTKMTAYAI LALLSGICTW FRPGGRLSKD
DVRETFLGMV LSLVSGAGMR ESFAEPPRLA AISRSGARRR