Gene M446_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2271 
Symbol 
ID6128934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2529060 
End bp2530196 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content69% 
IMG OID641642497 
Productextracellular ligand-binding receptor 
Protein accessionYP_001769165 
Protein GI170740510 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.731283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0249434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGC TGATGAAGGG GATGACGGCG GCAGCGATGC TGCTCGGTGC GGTCGCGGGC 
GCGGGCGCGC AGGACAAGTC GCCGGTGAAG CTCGGGGCCA TCGAGATCCT GACCGGGCCG
AACAGCCGCT ACGGCGTCGC GATCCAGCGC GGCTTCGACC TCGCGCTCGC GGAGATCAAC
CGGAACGGCG GCGTGCTCGG CGGGCGGCCG CTCGCCCTCG CCTACGAGGA CTCGGCCGGC
GCCAAGGAGC AGGCGCTCAA CGCCGCCCGC AAGCTGATCG GCCGCGACAA GGTCCCGCTG
ATCCTCGGAC CGACCCTGTC GAACGAGATG TTCGCCGCCG GGCCGGTCGC CAACGAGCGC
AAGGTGCCGA TCGTCGGCAC CTCCACCACG GCCAACGGCA TCACGGCGAT CGGCCCCTAC
GTGTTCCGCA CCTCGCTGCC CGAGGCCGAC GTCATCCCGG TGACGCTGCG GACCGCCAAG
GAGAAGTTCG GCGTCAAGCG CGTCGCCGTG ATGTACGGCA ACGACGACGC CTTCACCAAG
TCGGCCTACG ACGTGATGAA GGCCGGGCTC GAGAAGCTCG GCATCGAGAC CCTGACCACC
GAGACCTTCG GGTCGAAGGA CACCGACTTC TCGGCCCAGC TCACCAAGAT CAAGGGCCTG
AACCCGGACG CGATCGTGCT GTCGGCGCTG GTGGAGGCGG CGTCCGGCAT CGCGCTCCAG
GCCCGGCAGC TCGGCATCGA CCCGAAGGTG TTCATCATCG GCGGCAACGG CCTCAACTCG
CCCAAGCTCG GCGAGATCGC CGGCGCGGCG GCGGACGGCA CCATCGTCGG CAGCCCCTGG
TTCGTCGGCA AGAAGGATCC GGCGAACCAG GCCTTCGTGG CCGCCTTCCG CGAGAAGTAC
AGCGGCGACA GCCCCGACCA GTTCGCGGCC CAGGCCTACG ACACCCTGTT CATCGTCGCC
AAGGCGATCG ACGCGGCCGG GGCGCCGGAT TCCGAGAAGA TCAAGGACGC GCTCATCAAG
GTGAAGCACA GCGGCGTGAT GGGGCCGTTC TCCTTCTCGG AGAGCCGGGA CCCGGCCGAC
ACGTCGGGCG TCGTGGTCCT CACCATGAAG GGCGGCAAGT TCCAGCTGCT GGAGTGA
 
Protein sequence
MRSLMKGMTA AAMLLGAVAG AGAQDKSPVK LGAIEILTGP NSRYGVAIQR GFDLALAEIN 
RNGGVLGGRP LALAYEDSAG AKEQALNAAR KLIGRDKVPL ILGPTLSNEM FAAGPVANER
KVPIVGTSTT ANGITAIGPY VFRTSLPEAD VIPVTLRTAK EKFGVKRVAV MYGNDDAFTK
SAYDVMKAGL EKLGIETLTT ETFGSKDTDF SAQLTKIKGL NPDAIVLSAL VEAASGIALQ
ARQLGIDPKV FIIGGNGLNS PKLGEIAGAA ADGTIVGSPW FVGKKDPANQ AFVAAFREKY
SGDSPDQFAA QAYDTLFIVA KAIDAAGAPD SEKIKDALIK VKHSGVMGPF SFSESRDPAD
TSGVVVLTMK GGKFQLLE