| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2190 |
|---|
| Symbol | |
|---|
| ID | 6134742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 2439332 |
|---|
| End bp | 2439913 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641642417 |
|---|
| Product | sigma 54 modulation protein/ribosomal protein S30EA |
|---|
| Protein accession | YP_001769085 |
|---|
| Protein GI | 170740430 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0854444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.670301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCT TGCGCGTGTC GGGTCGCGGC ATGGACCTGG GGGAGACCCT GCGGTCGCGG
GTGGAGGAGC GGCTCGCCTC CACCCTGTCG AAGTACTTCG ACGGCTCCTA CTCGGGCCAC
GTCGCCGTGG GCCGGGACGG GGGCGCCTAC CGCACCGACT GCGTCCTCCA CCTCGCCTCA
GGCATCACCC TCGAAGCCTC GGCGAGCGCC CACGACCCGC ACGCGAGCTT CGAGCAGACC
GCCGACCGGA TCGAGCGCCG CCTGCGCCGC TACAAGCACC GGCTCAAAAC CCACGCCAAT
GGCGGGGGCC GGCGGGCCGA GCCGCCCACG GCGGTGATGG AGGCGGCCTA CTCGGTCCTG
GAGGCGCCCG AGGAGGATTC CGGCGACCAC CCGCCGGTGA TCGCGGAGAG CACCCGCGCC
CTGCACCGCC GCTCGGTGAG CGAGGCGGTG GTGGAGCTGG ATCTCACAGG CGCGCCCGTC
CTGGTCTTCG TTCATGCTGG CACCGATCGG GTCAACGTCG TATACCGTCG ATCCGACGGC
GCGATCGGCT GGATCGATCC GCCCGAACGC GGCACTCCGT GA
|
|---|
| Protein sequence | MAGLRVSGRG MDLGETLRSR VEERLASTLS KYFDGSYSGH VAVGRDGGAY RTDCVLHLAS
GITLEASASA HDPHASFEQT ADRIERRLRR YKHRLKTHAN GGGRRAEPPT AVMEAAYSVL
EAPEEDSGDH PPVIAESTRA LHRRSVSEAV VELDLTGAPV LVFVHAGTDR VNVVYRRSDG
AIGWIDPPER GTP
|
|---|
| |