| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2179 |
|---|
| Symbol | |
|---|
| ID | 6135261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 2425525 |
|---|
| End bp | 2426196 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641642406 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001769074 |
|---|
| Protein GI | 170740419 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.812633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGGA CGGGACGGCC GGACCTCGTG ATCTTCGATT GCGACGGGGT CCTGATCGAC
AGCGAGCCGA TCAGCCTCGC GCGGCTCACC GCCAACCTCA ACCGCATCGG CGTGCCGATC
GACCGCGAGA CCGTGGGGCG GCGCTTCACC GGCACCAGCA TGACCTCGAT CATGGCGCAT
ATCGCGGCGG ATTACGGGGT GGCGGCGCCC GAGGGCTTCG TGCGGGAGGT CCGGGCCGAC
ACGCTGCGGG CCTTCGAGGC GGAACTGACC GCGATCGCCG GGGTGGCCGA GGTGCTGGCC
CGCCTGCCCG GTCGCCGCTG CGTGGCGTCG AGCAGCGACC CGACGCGGCT CGCCCACGCC
CTCACCCTGA CGGGCCTGCT GCCGCTCTTC GACGGCCACG TCTTCAGCGC CAGCATGGTC
GCCCGCGGCA AGCCGCATCC GGACCTGTTC CTGTTCGCGG CCGAGCGGAT GCGGGCCGAT
CCGGCCGCCT GCCTGGTGAT CGAGGACAGC GTCCCGGGCG TGACGGCGGC CCGCGCGGCG
GGGATGCGCG TGTTCGGCTT CTCGGGCGGC GGCCATTGGC GCCACGACCC CGCGGCCACC
GCTCTCCTGG CCGCGGGCGC CGCCCTCGTC TTCGACGATT TCCTCCAACT GCCCGACCTG
ATCGGAGCGT GA
|
|---|
| Protein sequence | MDGTGRPDLV IFDCDGVLID SEPISLARLT ANLNRIGVPI DRETVGRRFT GTSMTSIMAH
IAADYGVAAP EGFVREVRAD TLRAFEAELT AIAGVAEVLA RLPGRRCVAS SSDPTRLAHA
LTLTGLLPLF DGHVFSASMV ARGKPHPDLF LFAAERMRAD PAACLVIEDS VPGVTAARAA
GMRVFGFSGG GHWRHDPAAT ALLAAGAALV FDDFLQLPDL IGA
|
|---|
| |