Gene M446_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2167 
Symbol 
ID6132295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2416591 
End bp2417337 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content75% 
IMG OID641642395 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001769063 
Protein GI170740408 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0908582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACA AGGTGTTGGT CGTCACCGGA GGCAGCCGCG GGATCGGGCG GGCGGTGTCC 
CTGCTCGCCG CGCGGCGCGG CTGGGCCGTC TGCCTCTCCT ACGTGGCGAA CGCGGAGGCG
GCGGACGCGG TCGTGCGCGA GATCGAGGCG TCCGGCGGCC GGGCGCTCGC GGTGCGCAGC
GACGTCGCGG TCGAGGCGGA GGTGGCCGCC CTGTTCGAGG CGGCGGACCG GCTCGGGCCC
CTCGGCGGGC TCGTCAACAA CGCGGGCGTC GTCGACCACC CGGCCCGCGT CGAGGACATG
ACGGCCGCCC GCCTGACCCG GATGATGGCG ACGAACGTCG TCGGCTCCTT CCTCTGCGCC
GCCCAGGCCG TGCGGCGGAT GTCGACCAAG CGCGGCGGGC GGGGCGGCGC CATCGTCAAC
CTGTCCTCGG TGGCGGCGCG CCTCGGCGCC CCCCACCAGT ACGTCGATTA CGCGGCCTCG
AAGGGCGCCA TCGACACCTT CACGACCGGC CTCGCGGTCG AGGTCGCCGA GGAGGGGATC
CGCGTCAACG CGGTGGCGCC GGGGCTGATC GACACCGAGA TCCACGCCAG CGGCGGGCAG
CCGGACCGGG CCCATCGCCT CGCCCCCTCG GTGCCGATGC GGCGCGTCGG CACGGCGGAG
GAGATCGCCG CGCCGATCCT CTGGCTGCTC TCCGACGAGG CCTCCTACAC GACCGGCACC
ATCGTCACGG TCTCGGGCGG CCGCTGA
 
Protein sequence
MMDKVLVVTG GSRGIGRAVS LLAARRGWAV CLSYVANAEA ADAVVREIEA SGGRALAVRS 
DVAVEAEVAA LFEAADRLGP LGGLVNNAGV VDHPARVEDM TAARLTRMMA TNVVGSFLCA
AQAVRRMSTK RGGRGGAIVN LSSVAARLGA PHQYVDYAAS KGAIDTFTTG LAVEVAEEGI
RVNAVAPGLI DTEIHASGGQ PDRAHRLAPS VPMRRVGTAE EIAAPILWLL SDEASYTTGT
IVTVSGGR