| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2164 |
|---|
| Symbol | sucA |
|---|
| ID | 6132706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 2411898 |
|---|
| End bp | 2414858 |
|---|
| Gene Length | 2961 bp |
|---|
| Protein Length | 986 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641642392 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_001769060 |
|---|
| Protein GI | 170740405 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.668093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0814418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCC AGGACGCGAA CGAAACCCTT CTCGGCACCT CGTTCCTCTA CGGGGCGAAC
GCCGCCTACA TCGAGGACCT CTACGCGGCC TACACGAAGG ATCCGAACTC CGTCGATCCG
GAGTGGCGGA GCTTCTTCGC CGGCCTGAAG GAGGAGAAGG CCATCGTCGT CAAGAACGCC
GAGGGGGCGT CCTGGACGAA GCCGAACTGG CCGGTCGCCG CCAACGGCGA GCTGGTCTCG
GCCCTCGACG GCAACTGGTC GACCCTGGAG AAGGCGGTCG GCGACAAGAT CAAGTCCCGC
GCCGAGGCCA AGGGCGCGCC GATTGCACCG GCCGACGTGC AGCAGGCGAC CAAGGATTCC
GTGCGCGCGA TCATGCTGAT CCGCGCCTAC CGCATGCGCG GCCACCTGCA CGCCAAGCTC
GACCCGCTCG GCCTGCAGCT GCGCGGCGAC CACGAGGAGC TGCACCCGCA GCATTACGGG
TTCACGGACG CCGATTACGA CCGGCCGATC TTCCTCGACA ACGTGCTGGG CCTCGAATTC
TCGACGATCC GCGAGATCGT CGCGATCCTG CGGCGCACCT ACTGCCAGAC GCTCGGCGTC
GAGTTCATGC ACATCTCCGA CCCCGAGGAG AAGGCCTGGA TCCAGGAGCG CATCGAGGGC
AAGGACAAGG AGATCTCCTT CACCGAGCAG GGCAGGCGGG CCATCCTCAA CAAGCTCATC
GAGGCGGAGG GCTTCGAGAA GTTCCTCGAC CTCAAGTACA CGGGCACCAA GCGCTTCGGC
CTCGACGGCT CCGAGGCGAT GGTCCCGGCG CTGGAGCAGA TCATCAAGCG CGGCGGCGCG
CTCGGCGTGA AGGAGATCGT GGTCGGCATG GCCCATCGCG GCCGGCTGAA CGTGCTCGCC
AACGTGATGA GCAAGCCGTT CCGGGCGATC TTCCACGAGT TCAAGGGCGG CTCGGCCTCG
CCGGAGGAGG TCGAGGGGTC GGGCGACGTG AAGTACCACC TCGGCGCGTC GAGCGACCGC
AGCTTCGACG GCAACGGCGT CCACCTGTCG CTCACCGCCA ACCCGTCGCA CCTGGAGATC
GTCGATCCGG TCGTGCTCGG CAAGGTCCGC GCCAAGCAGG ACCAGCACAA CGACGCGCCC
GACCAGCGCA CCTCGGTGCT GCCGCTCCTC ATCCACGGCG ACGCCGCCTT CGCGGGCCAG
GGCGTGGTGG CGGAGTGCCT CGGCCTCTCG GGGCTGAAGG GCCACCGCAC CGGCGGCTCG
ATCCACTTCA TCATCAACAA CCAGATCGGC TTCACCACCG ATCCGCGCTT CTCGCGCTCC
TCGCCCTATC CGTCCGACGT CGCCAAGATG GTCGAGGCGC CGATCTTCCA CTGCAACGGC
GACGACCCCG AGGCCGTGGT CTTCGCCGCC AAGGTCGCGA CCGAGTACCG GCAGAAGTTC
CACAAGCCGG TGGTCATCGA CATGCTGTGC TACCGCCGCT TCGGCCACAA CGAGGGCGAC
GAGCCGGCGT TCACGCAGCC GAAGATGTAC AAGATCATCC GCAAGCACCC CTCGACGCTG
GAGATCTACG GCAAGCGGCT GGTCGAGGCC GGGGCCGTCA AGGAGGCGGA CCTCGAAGCC
CGCAAGTCCG AGTTCCGGTC GACGCTCGAC AGCGAGTTCG ACGTCGCCAA CGCCTACAAG
GCCAACAAGG CGGATTGGCT CGACGGCCGC TGGTCGGGCC TGAAGTCGGT GCGCGAGGAC
GAGGACGACC CGCGCCGCGG CCGCACCGGC GTGCCGGCCG AGACCCTGCG CGAGATCGCC
CGCCAGATCA CCAAGGTCCC GGCGAATTTC CGCCTCCACC GCACGATCCA GCGCTTCCTC
GACAACCGCG CCAAGGCGAT CGAGACCGGA GAGGGGCTCG ACTGGGCGAC CGCCGAGGCC
CTCGCCTACG GCTCGCTGCT GACCGAGCAT CACCGGGTCC GGCTCTCCGG CCAGGACGTG
GAGCGCGGCA CCTTCTCGCA GCGCCACTCG GTGCTGATCG ACCAGGAGAC CGAGGAGCGC
TACACGCCCC TCAACCACAT CCGCGAGGGG CAGGCCCGCT ACGAGGTCAT CAACTCGATG
CTCTCGGAGG AGGCGGTGCT CGGCTTCGAG TACGGCTACT CGCTCGCCGA GCCCAACGCC
CTGGTACTGT GGGAGGCGCA GTTCGGCGAC TTCGCCAACG GCGCGCAGGT CGTGATCGAC
CAGTTCATCT CCAGCGGCGA GCGCAAGTGG CTGCGCATGT CGGGTCTCGT GATGCTGCTG
CCGCACGGCT ACGAGGGCCA GGGGCCGGAG CATTCCTCGG CCCGGCTGGA GCGCTACCTG
CAGCTCTGCG CCGAGGACAA CATGCAGGTC GCCAACTGCA CGACGCCCTC GAACTACTTC
CACATCCTGC GCCGGCAGCT GAAGCGCGAC TTCCGCAAGC CGCTCGTGCT GATGACCCCG
AAGTCGCTCC TGCGCCACAA GCGCGCGGTG TCGCGGCTCG ACGAACTCAC CGAGGGGTCG
AGCTTCCACC GGGTGCTCTG GGACGATGCC GAGAAGACGC CGGACGGCAT CAGGCTCGTC
AAGGACGACA AGATCCGTCG CGTCGTGCTC TGCTCGGGCA AGGTCTACTA CGACCTGTTC
GAGGAGCGCG AGAAGCGGGG CATCAACGAC GTCTACCTGA TGCGCGTCGA GCAGCTCTAC
CCGTTCCCGC TGAAGTCGCT GGCCGGGGAG GTGTCGCGCT TCCGCAACGC CGAGGTGATC
TGGTGTCAGG AGGAGCCCAA GAACATGGGC GCCTGGACCT TCGTCGAGCC CTATCTCGAG
TGGGTCCTCA ACCAGGCGGG CGTGGCCTCG AAGCGGCCGC GCTACGTCGG GCGCCCGGCC
TCGGCCTCGA CGGCGGTCGG CCTGATGTCG AAGCACATGG CTCAGCTCCA GGCCTTCCTC
AACGAGGCCC TGGCGGTCTG A
|
|---|
| Protein sequence | MARQDANETL LGTSFLYGAN AAYIEDLYAA YTKDPNSVDP EWRSFFAGLK EEKAIVVKNA
EGASWTKPNW PVAANGELVS ALDGNWSTLE KAVGDKIKSR AEAKGAPIAP ADVQQATKDS
VRAIMLIRAY RMRGHLHAKL DPLGLQLRGD HEELHPQHYG FTDADYDRPI FLDNVLGLEF
STIREIVAIL RRTYCQTLGV EFMHISDPEE KAWIQERIEG KDKEISFTEQ GRRAILNKLI
EAEGFEKFLD LKYTGTKRFG LDGSEAMVPA LEQIIKRGGA LGVKEIVVGM AHRGRLNVLA
NVMSKPFRAI FHEFKGGSAS PEEVEGSGDV KYHLGASSDR SFDGNGVHLS LTANPSHLEI
VDPVVLGKVR AKQDQHNDAP DQRTSVLPLL IHGDAAFAGQ GVVAECLGLS GLKGHRTGGS
IHFIINNQIG FTTDPRFSRS SPYPSDVAKM VEAPIFHCNG DDPEAVVFAA KVATEYRQKF
HKPVVIDMLC YRRFGHNEGD EPAFTQPKMY KIIRKHPSTL EIYGKRLVEA GAVKEADLEA
RKSEFRSTLD SEFDVANAYK ANKADWLDGR WSGLKSVRED EDDPRRGRTG VPAETLREIA
RQITKVPANF RLHRTIQRFL DNRAKAIETG EGLDWATAEA LAYGSLLTEH HRVRLSGQDV
ERGTFSQRHS VLIDQETEER YTPLNHIREG QARYEVINSM LSEEAVLGFE YGYSLAEPNA
LVLWEAQFGD FANGAQVVID QFISSGERKW LRMSGLVMLL PHGYEGQGPE HSSARLERYL
QLCAEDNMQV ANCTTPSNYF HILRRQLKRD FRKPLVLMTP KSLLRHKRAV SRLDELTEGS
SFHRVLWDDA EKTPDGIRLV KDDKIRRVVL CSGKVYYDLF EEREKRGIND VYLMRVEQLY
PFPLKSLAGE VSRFRNAEVI WCQEEPKNMG AWTFVEPYLE WVLNQAGVAS KRPRYVGRPA
SASTAVGLMS KHMAQLQAFL NEALAV
|
|---|
| |