Gene M446_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2152 
Symbol 
ID6132452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2400323 
End bp2401726 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content77% 
IMG OID641642380 
ProductL-seryl-tRNA(Sec) selenium transferase 
Protein accessionYP_001769048 
Protein GI170740393 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] 
TIGRFAM ID[TIGR00474] seryl-tRNA(sec) selenium transferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.536449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCC CCTCCCCCGC CCGCCTGCCC GCCGTCGAGC GCCTCCTCGG CCATCCCGAC 
CTCGCGCGGC GCGCGGCCGC GCACGGCCGC ACCCTGGTGA CCGAGGCGGT TCGGGCGGTG
CTCGGCGAGA TCCGGCAGGC CCGGCTGCCC GCCCCGCCCG CGGACGCCCT CGCGGAGGCC
GTCGGCGCGC GGCTCGACGC GTGGCTCACG CCCTCGCTGC GGCCGGTCTT CAACCTCACC
GGGACGGTGC TGCACACCAA TCTCGGCCGG GCCCTGCTGC CCCGCGAGGC GGCGGAGGCG
GTCGTCGCCG CGATGACCCG GCCGACCAAC CTCGAGCTCG ACCTCGCCAC CGGGCGCCGC
GGCGAGCGCG ACGCCCACGC GGAGGCGCTG ATCTGCCGCC TCACCGGGGC GGAGGCGGCG
ACGGTCGTCA ACAACAACGC GGCGGCGGTG CTCCTCGTCC TCACGGCCCT GGCGCGGCGG
CGGGAGGTGC CGGTCTCCCG CGGGGAGCTG GTCGAGATCG GCGGCGCCTT CCGGATGCCG
GACGTGATGG CCCGGGCCGG CAGCCGCCTC GTCGAGATCG GCACCACCAA CCGCACCCAC
CTCGCCGATT ACGCGGCGGC GATCGGGCCG CGCACCGGCC TGGTGATGCG GGTGCATCCG
AGCAATTACG CGATCCAGGG ATTCACGGCC GCGCCCGATC CCGCGGCGCT GCACGCCCTG
TGCCGGGAGC GCGGCCTGCC CTTCTGCGTC GATCTCGGCA GCGGCGCGCT CGTCGACCTC
GCGGCTTACG GCCTGCCGCG CGAGCCCGTG GTCCGCGAGG CGCTGGCCGA TGCCGACCTC
GTGCTGTTCA GCGGCGACAA GCTGATGGGC GGCGTGCAGT GCGGGATCGT CGCGGGCCGC
GCCGACCTGG TGGCGCGGCT GCGCCGGGAC CCGCTGAAGC GGGCGCTGCG GGTCGACAAG
ATGACCCTCG CGGCCCTGGA GGCGGTGCTG CGGCTCTACC GGGAGCCCGA GCGCCTACGC
GAGCGGCTGC CCACCCTGCG GCTGCTGACC CGCCCCCAGG CGGAGATCCG GGCGCAGGCC
GAGGCCCTGG CCCCGATCGT GGCGCGGGCC CTCGGCGCGC AGGCGCGCGT CGCGGTCGAG
CCCTGCCTCA GCCAGGTCGG CTCCGGGTCG CTGCCGGTCG AGAGCCTGCC GAGCGCCGCC
CTCGTCCTGC GTCCCGCCTC CGTCAAGGGG GCGGGCACCT CCGGCAAGGG GGCGGGCGCT
TGGCCCGAGC GCCTCGCGGC GCGGTTCCGG GCGCTTCCCG TCCCGGTGCT CGGGCGCGTC
GCGGAGGGGG CCTACCGCCT CGACCTGCGC ACCCTGGACG ACGCGGATGC CTTCGCGGAC
CAGATCCTAC TCCGTCCGTT CTAG
 
Protein sequence
MDAPSPARLP AVERLLGHPD LARRAAAHGR TLVTEAVRAV LGEIRQARLP APPADALAEA 
VGARLDAWLT PSLRPVFNLT GTVLHTNLGR ALLPREAAEA VVAAMTRPTN LELDLATGRR
GERDAHAEAL ICRLTGAEAA TVVNNNAAAV LLVLTALARR REVPVSRGEL VEIGGAFRMP
DVMARAGSRL VEIGTTNRTH LADYAAAIGP RTGLVMRVHP SNYAIQGFTA APDPAALHAL
CRERGLPFCV DLGSGALVDL AAYGLPREPV VREALADADL VLFSGDKLMG GVQCGIVAGR
ADLVARLRRD PLKRALRVDK MTLAALEAVL RLYREPERLR ERLPTLRLLT RPQAEIRAQA
EALAPIVARA LGAQARVAVE PCLSQVGSGS LPVESLPSAA LVLRPASVKG AGTSGKGAGA
WPERLAARFR ALPVPVLGRV AEGAYRLDLR TLDDADAFAD QILLRPF