Gene M446_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2126 
Symbol 
ID6130687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2375271 
End bp2376521 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content69% 
IMG OID641642354 
Productextracellular ligand-binding receptor 
Protein accessionYP_001769022 
Protein GI170740367 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.201717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGTC GTCGGGATCT ACTGGTCGGG GGCGCGGGCG CCCTGGCCCT CTCCGGGATG 
GGCGCGGCGC CCGCCCGCGC CGCGGACGAG GTCGTCGTCG GCGTCCTCTA CGCGATGTCG
GGAGCGAGCG CGCAGGTGGG CGTGGATGCC CGCCACGCCA TCGAGACCGC CCTCGACATC
GTCAACCAGA ACCACGACCT CGACCTGCCG CTCGCCCGCG GCACCGGCCT GCCGGGGCTC
GGCGGCGCCA GGATCCGCCT CGTCTTCGCC GACCACCAGG CCGATCCCCA GAAGGGCCGC
GCCGAGGCCG AGCGCCTGAT CACCCAGGAC AAGGTCGCGG CCCTGGTCGG CTGCTACCAG
TCGGCGGTCT CCGCCACGGT CTCGGCCACG GCCGAGCGCT ACGGCGTGCC CTTCGTCTGC
GCGGATTCCT CCTCGCCCAG CCTGCATCGC AAGAACCTGA AGTACTTCTT CCGTCCGGCC
GCCCACGACG AGATGTTCTC GGCCGCGATG TTCGATTTCC TGGACGCGAT GCGCAAGAAG
GGCCAGAAGA TCGACTCGGT CGCGCTGTTC TTCGAGGACA CGATCTACGG GGTCGATTCC
TCGACCGTGC AGCGCAAGCT GGCCGGCGAG CGCGGCTACA AGGTGGCCGC GGATGTCAAG
TACAAGACCA ACTCGCCCTC CCTGACCGCC GAAGTGCAGC AGCTCAAGAG CGCCAACGCC
GACGTGCTGC TGCCGACGAG CTACACGACC GACGCGATCC TGCTCACCAA GACCATGGCG
GAACTCGGCT ACAAGCCGAA GAGCATGATC GCGCAGGCGG CGGGTTTCGC CGAGAAGGTC
ACCTACGACA CGGTCGGAGA CAAGCTCCAG GGCCTGATCT CGCGGGGCAG CTTCTCCCTC
GACCTCGCGG CCAAGCGCCC CTCGGTCGGG GCCGTGAACG ACCTCTACCG GGCGCGGGCG
AACCGCGACC TCAACGACAA TTCCTCGCGC CAGTTCATGG CGATGCTGGT GCTGGCGGAG
GCCCTGAACC GCGCCGGGTC GACCGACGGC CAGAAGATCC GCGCCGCGCT GGCGGCCACC
GATATCCCGG GCACCCAGAC CATCATGCCC TGGAAGCGGG TCGCCTTCGG GCCGGACGGC
CAGAACACCG ATGCAGATCC GGTGCTGCTG CAATGGGTCG GCACGAAGTT CGTCACGGTC
TTCCCCGAGC AGGCCGCCGT CGCCCCCGCG CTCTGGCCGA TGAACGCGTG A
 
Protein sequence
MIRRRDLLVG GAGALALSGM GAAPARAADE VVVGVLYAMS GASAQVGVDA RHAIETALDI 
VNQNHDLDLP LARGTGLPGL GGARIRLVFA DHQADPQKGR AEAERLITQD KVAALVGCYQ
SAVSATVSAT AERYGVPFVC ADSSSPSLHR KNLKYFFRPA AHDEMFSAAM FDFLDAMRKK
GQKIDSVALF FEDTIYGVDS STVQRKLAGE RGYKVAADVK YKTNSPSLTA EVQQLKSANA
DVLLPTSYTT DAILLTKTMA ELGYKPKSMI AQAAGFAEKV TYDTVGDKLQ GLISRGSFSL
DLAAKRPSVG AVNDLYRARA NRDLNDNSSR QFMAMLVLAE ALNRAGSTDG QKIRAALAAT
DIPGTQTIMP WKRVAFGPDG QNTDADPVLL QWVGTKFVTV FPEQAAVAPA LWPMNA