| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2122 |
|---|
| Symbol | |
|---|
| ID | 6130683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 2371478 |
|---|
| End bp | 2372743 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641642350 |
|---|
| Product | D-amino-acid dehydrogenase |
|---|
| Protein accession | YP_001769018 |
|---|
| Protein GI | 170740363 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.17481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.029766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTTC TCGTCCTGGG TGGCGGCGTT GTGGGTGTGA CCTCGGCCTA TTACCTCGCC
CGGGCCGGGC ACGAGGTCAC GGTGCTCGAC CGCCAGCCCG GCGCGGGGCT GGAGACCAGC
TTTGCCAATG CGGGCCAGGT CTCGCCCGGC TACTCGGCCC CCTGGGCGGC CCCCGGCATC
CCGCTCAAGG CCATGAAGTG GCTGATGATG CGCCACCGGC CGCTGGTGCT CTGGCCGCAG
CTCGAGCCGC GCCTCTACGG CTGGCTCGCC CGGATGCTCG CCAATTGCAC GCAGGAGGCC
TATCAGCGCA ACAAGGGCCG CATGGTCCGC CTCGCCGAGT TCAGCCGCGA CGCCCTTCGC
GACCTGCGCG GGGAGACCGG CATCGCCTAC GACCACCGCG AGAAGGGCAC GCTCCAGCTC
TTCCGCACCC GCAAGCAGCT CGACCATGTC GGCGACGACA CCCGCGTCCT CGACGCCTAC
GGGGTCGCCT ACGAGGTGCT GGATCCGGAG GGCTGCATCG CCGCCGAGCC CGCGCTCGCG
CGGGTGAGGG ACACGTTCGT CGGGGGTCTG CGCCTGCCCG GCGACGAGAC CGGCGACGCG
CACCTCTTCA CGCAGCGCCT CGCCGCCCTC TGCGCGGACC GCGGCGTGCG CTTCCGCTTC
GGGGTCGCGG TGGCGCGGCT GCACCACGAG GCCGGGCGCG TCACCGGCGT CGAGACCGCC
ACCGGCGAGG TGCTGCGGGC GGAGGCCTAC GTGGCCGCCA TGGGCAGCTA CACGCCCGCG
CTCCTGCGCC CCCTCGGCCT GTCGCTGCCG GTCTATCCGG TCAAGGGCTA CTCGCTCACC
CTGCCGGTGA CGGACGAGGG CTCGGCCCCG GTCTCGACCG TCATGGACGA GACCTACAAG
GTCGCGATCA CGCGGCTCGG CGACCGGATC CGGGTCGGCG GCACGGCGGA ACTGGCGGGG
TTCAGCCAGG CGCTGCGGGG GCCCCGCCGC GCGACCCTGG AGCGCTCGCT GACGGACCTG
TTCCCGGCGG GCGGCGACCT CTCCCGGGCG ACGTTCTGGA CGGGCCTGCG CCCGATGACC
CCGGACGGGA CCCCGATCGT CGGCGCCACG GCCTACGGGA ATCTCTACAC CAATACGGGG
CACGGGACGC TCGGCTGGAC CATGGCCTGC GGCTCGGGCC GGATGCTCGC CGACCTGATC
ACGGGCCGCC ACCCGGAGAT CGCGCACGAG GATTTCGCGG AGCGGCGCTA CCGCCGGGCG
GCCTGA
|
|---|
| Protein sequence | MRVLVLGGGV VGVTSAYYLA RAGHEVTVLD RQPGAGLETS FANAGQVSPG YSAPWAAPGI
PLKAMKWLMM RHRPLVLWPQ LEPRLYGWLA RMLANCTQEA YQRNKGRMVR LAEFSRDALR
DLRGETGIAY DHREKGTLQL FRTRKQLDHV GDDTRVLDAY GVAYEVLDPE GCIAAEPALA
RVRDTFVGGL RLPGDETGDA HLFTQRLAAL CADRGVRFRF GVAVARLHHE AGRVTGVETA
TGEVLRAEAY VAAMGSYTPA LLRPLGLSLP VYPVKGYSLT LPVTDEGSAP VSTVMDETYK
VAITRLGDRI RVGGTAELAG FSQALRGPRR ATLERSLTDL FPAGGDLSRA TFWTGLRPMT
PDGTPIVGAT AYGNLYTNTG HGTLGWTMAC GSGRMLADLI TGRHPEIAHE DFAERRYRRA
A
|
|---|
| |