Gene M446_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2085 
Symbol 
ID6134826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2331037 
End bp2332758 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content72% 
IMG OID641642314 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001768982 
Protein GI170740327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.024834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATTC CCGGCATCGG CACCGCGGCC GACAACCCGA CGCACCGCGT CCCGGACGAC 
GATCCCGAGC AGGTTCCCCG CGCCCGGGAC GGGCGGGCGC CGAACGTGAT GCGGATCGGC
GAGTGGGTGC CGATGCGCCA GCACCGCGAC GAGGAGGAGG TCGACTTCGC CATCGTGGGC
ACCGGGGCCG GGGGCGGCAC CCTCGCCTGC CGGCTGGCCG AGCAGGGCTT CTCCGTCGTC
GCCCTCGATG CCGGACCGTA CTGGCGGCCG CTGGAGGATT TCGCCTCCGA CGAGAGCCAC
CAGTCGAAGC TCTACTGGAC CGACGAGCGC CTCGTCGACG GCGACAACCC GCTGCAGATG
GGCTCGAACA ATTCCGGCCG GGCGGTGGGC GGCTCGACCG TCCACTTCGC CATGGTGTCG
CTGCGCTTCC GGCCCGAGTG GTTCCGCTCG CGCAGCCTCC TCGGCTACGG CGCCGACTGG
CCGCTCGATT GGCGCGAGAT GTGGGACTAT TACGGGCAGG TCGAGCAGGC GCTGAAGATC
GCCGGGCCGG TGACCTATCC GTGGGGCCCC AAGCGACCCC GCTACCCGTA CCGTGCCCAC
GAACTCAACG CGGCCGCCCG GGTGCTGGCC CGCGGCGCGG AGGCGCTCGG CATCGGCTGG
GCGCCGACGC CCCTCGCCAC CGTCTCGGCG CCGCGGGGCG ACTCGCCGCC CTGCGTCTAT
CGCGGCTTCT GCACGCTCGG CTGCTCGACC AACGCCAAGC AGAGCGTGCT CGTCACCTGG
CTGCCCCGCG CCCTGCGGGC CGGCGCCGAG ATCCGCGACC TCGCCATGGT CGGCCGGATC
GAGACGCGCA ACCGCCGCGC CACCGGGCTG CACTACCACC GCGAGGGGCG CTGGCGCTTC
CAGCGGGCGC GCCACGTGGT GGTGGCGGGC TACGCGATCG AGACCCCGCG CCTCCTGCTG
ATGTCCGCCA CTCCGGACTT CCCGGACGGC CTCGCCAATT CCTCGGGGCT GGTCGGCCGC
TACCTCACGG TGCAGGGCAA CCAGGCGGTC TGGGGCGTGA TGGAGGAGGA GGTCCGCTCC
TACAAGGGCC CGCCCTCCCT GGCCCTCACC GAGCACTGGA ACTACGAGGA CGAGGGCAAG
GACTTCTTCG GCGGCTATTG CTACATGAGC CAGGGCCCGC TGCCGAGCCT GTGGAGCCGC
ACGCTCGCGG GCAGCCGCGG CCTGTGGGGC GACGCGCTCA TCGCCGAGAT GCAGCGCTAC
AACCACGTCG CCGGGCTCAA AGTCGTCTCC GAATACATGC CGCAGGAGCG CAACGGCGTG
ACCCTGGCGG AGGAGACCGA CCGCTACGGC CTGCCGATCC CGCGGATCAC CTATTCGTGG
TGCGACAACG ACAGGGCCGT GAACCGGCAC AGCCTCGCCT TCATGCGGCA GGCCCTCGCG
GCGGCCGGCG CCCGCGAGAT CTGGGCGCAG GAGGACGACA CCTGCCACCT CAACGGGACC
GCCCGGATGG GCAGCTATCC CCGCACCAGC GTCGTCGACG CCGATTGCCG CTCCTGGGAC
ATCCCGAACC TCTGGATCTG CGACGGCTCC GTCTTCCCGA CCGTGGGCGG GGTCAACCCG
TCCCTGACGA TCCAGGCGAT CGCGCTGCGC ACCGCCGACC GGATCGGGGC GCTCGCCGCC
CGCGGGGACC TTTCGGCCCG CTCCCGCGCT TGGTCCGGGT GA
 
Protein sequence
MRIPGIGTAA DNPTHRVPDD DPEQVPRARD GRAPNVMRIG EWVPMRQHRD EEEVDFAIVG 
TGAGGGTLAC RLAEQGFSVV ALDAGPYWRP LEDFASDESH QSKLYWTDER LVDGDNPLQM
GSNNSGRAVG GSTVHFAMVS LRFRPEWFRS RSLLGYGADW PLDWREMWDY YGQVEQALKI
AGPVTYPWGP KRPRYPYRAH ELNAAARVLA RGAEALGIGW APTPLATVSA PRGDSPPCVY
RGFCTLGCST NAKQSVLVTW LPRALRAGAE IRDLAMVGRI ETRNRRATGL HYHREGRWRF
QRARHVVVAG YAIETPRLLL MSATPDFPDG LANSSGLVGR YLTVQGNQAV WGVMEEEVRS
YKGPPSLALT EHWNYEDEGK DFFGGYCYMS QGPLPSLWSR TLAGSRGLWG DALIAEMQRY
NHVAGLKVVS EYMPQERNGV TLAEETDRYG LPIPRITYSW CDNDRAVNRH SLAFMRQALA
AAGAREIWAQ EDDTCHLNGT ARMGSYPRTS VVDADCRSWD IPNLWICDGS VFPTVGGVNP
SLTIQAIALR TADRIGALAA RGDLSARSRA WSG