Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_2085 |
Symbol | |
ID | 6134826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 2331037 |
End bp | 2332758 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641642314 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001768982 |
Protein GI | 170740327 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.024834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGATTC CCGGCATCGG CACCGCGGCC GACAACCCGA CGCACCGCGT CCCGGACGAC GATCCCGAGC AGGTTCCCCG CGCCCGGGAC GGGCGGGCGC CGAACGTGAT GCGGATCGGC GAGTGGGTGC CGATGCGCCA GCACCGCGAC GAGGAGGAGG TCGACTTCGC CATCGTGGGC ACCGGGGCCG GGGGCGGCAC CCTCGCCTGC CGGCTGGCCG AGCAGGGCTT CTCCGTCGTC GCCCTCGATG CCGGACCGTA CTGGCGGCCG CTGGAGGATT TCGCCTCCGA CGAGAGCCAC CAGTCGAAGC TCTACTGGAC CGACGAGCGC CTCGTCGACG GCGACAACCC GCTGCAGATG GGCTCGAACA ATTCCGGCCG GGCGGTGGGC GGCTCGACCG TCCACTTCGC CATGGTGTCG CTGCGCTTCC GGCCCGAGTG GTTCCGCTCG CGCAGCCTCC TCGGCTACGG CGCCGACTGG CCGCTCGATT GGCGCGAGAT GTGGGACTAT TACGGGCAGG TCGAGCAGGC GCTGAAGATC GCCGGGCCGG TGACCTATCC GTGGGGCCCC AAGCGACCCC GCTACCCGTA CCGTGCCCAC GAACTCAACG CGGCCGCCCG GGTGCTGGCC CGCGGCGCGG AGGCGCTCGG CATCGGCTGG GCGCCGACGC CCCTCGCCAC CGTCTCGGCG CCGCGGGGCG ACTCGCCGCC CTGCGTCTAT CGCGGCTTCT GCACGCTCGG CTGCTCGACC AACGCCAAGC AGAGCGTGCT CGTCACCTGG CTGCCCCGCG CCCTGCGGGC CGGCGCCGAG ATCCGCGACC TCGCCATGGT CGGCCGGATC GAGACGCGCA ACCGCCGCGC CACCGGGCTG CACTACCACC GCGAGGGGCG CTGGCGCTTC CAGCGGGCGC GCCACGTGGT GGTGGCGGGC TACGCGATCG AGACCCCGCG CCTCCTGCTG ATGTCCGCCA CTCCGGACTT CCCGGACGGC CTCGCCAATT CCTCGGGGCT GGTCGGCCGC TACCTCACGG TGCAGGGCAA CCAGGCGGTC TGGGGCGTGA TGGAGGAGGA GGTCCGCTCC TACAAGGGCC CGCCCTCCCT GGCCCTCACC GAGCACTGGA ACTACGAGGA CGAGGGCAAG GACTTCTTCG GCGGCTATTG CTACATGAGC CAGGGCCCGC TGCCGAGCCT GTGGAGCCGC ACGCTCGCGG GCAGCCGCGG CCTGTGGGGC GACGCGCTCA TCGCCGAGAT GCAGCGCTAC AACCACGTCG CCGGGCTCAA AGTCGTCTCC GAATACATGC CGCAGGAGCG CAACGGCGTG ACCCTGGCGG AGGAGACCGA CCGCTACGGC CTGCCGATCC CGCGGATCAC CTATTCGTGG TGCGACAACG ACAGGGCCGT GAACCGGCAC AGCCTCGCCT TCATGCGGCA GGCCCTCGCG GCGGCCGGCG CCCGCGAGAT CTGGGCGCAG GAGGACGACA CCTGCCACCT CAACGGGACC GCCCGGATGG GCAGCTATCC CCGCACCAGC GTCGTCGACG CCGATTGCCG CTCCTGGGAC ATCCCGAACC TCTGGATCTG CGACGGCTCC GTCTTCCCGA CCGTGGGCGG GGTCAACCCG TCCCTGACGA TCCAGGCGAT CGCGCTGCGC ACCGCCGACC GGATCGGGGC GCTCGCCGCC CGCGGGGACC TTTCGGCCCG CTCCCGCGCT TGGTCCGGGT GA
|
Protein sequence | MRIPGIGTAA DNPTHRVPDD DPEQVPRARD GRAPNVMRIG EWVPMRQHRD EEEVDFAIVG TGAGGGTLAC RLAEQGFSVV ALDAGPYWRP LEDFASDESH QSKLYWTDER LVDGDNPLQM GSNNSGRAVG GSTVHFAMVS LRFRPEWFRS RSLLGYGADW PLDWREMWDY YGQVEQALKI AGPVTYPWGP KRPRYPYRAH ELNAAARVLA RGAEALGIGW APTPLATVSA PRGDSPPCVY RGFCTLGCST NAKQSVLVTW LPRALRAGAE IRDLAMVGRI ETRNRRATGL HYHREGRWRF QRARHVVVAG YAIETPRLLL MSATPDFPDG LANSSGLVGR YLTVQGNQAV WGVMEEEVRS YKGPPSLALT EHWNYEDEGK DFFGGYCYMS QGPLPSLWSR TLAGSRGLWG DALIAEMQRY NHVAGLKVVS EYMPQERNGV TLAEETDRYG LPIPRITYSW CDNDRAVNRH SLAFMRQALA AAGAREIWAQ EDDTCHLNGT ARMGSYPRTS VVDADCRSWD IPNLWICDGS VFPTVGGVNP SLTIQAIALR TADRIGALAA RGDLSARSRA WSG
|
| |